Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Gm13186-201ENSMUST00000118031 316 ntBASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna3Q8R4G9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Gm37722-201ENSMUST00000193757 208 ntBASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.41■□□□□ 0.22
Chrna3Q8R4G9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Gm33142-201ENSMUST00000193913 867 ntBASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms