Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup85Q8R480 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nup85Q8R480 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup85Q8R480 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup85Q8R480 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup85Q8R480 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup85Q8R480 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nup85Q8R480 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nup85Q8R480 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nup85Q8R480 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Gm16061-201ENSMUST00000122167 857 ntBASIC17.17■□□□□ 0.34
Nup85Q8R480 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.17■□□□□ 0.34
Nup85Q8R480 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nup85Q8R480 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nup85Q8R480 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nup85Q8R480 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.16■□□□□ 0.34
Nup85Q8R480 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.16■□□□□ 0.34
Nup85Q8R480 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.16■□□□□ 0.34
Nup85Q8R480 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.16■□□□□ 0.34
Nup85Q8R480 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.16■□□□□ 0.34
Nup85Q8R480 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.16■□□□□ 0.34
Nup85Q8R480 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nup85Q8R480 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Nup85Q8R480 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Nup85Q8R480 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.15■□□□□ 0.34
Nup85Q8R480 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.15■□□□□ 0.34
Nup85Q8R480 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.15■□□□□ 0.34
Nup85Q8R480 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.15■□□□□ 0.34
Nup85Q8R480 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nup85Q8R480 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nup85Q8R480 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nup85Q8R480 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nup85Q8R480 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup85Q8R480 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nup85Q8R480 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup85Q8R480 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup85Q8R480 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.14■□□□□ 0.33
Nup85Q8R480 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup85Q8R480 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Nup85Q8R480 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Nup85Q8R480 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup85Q8R480 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.14■□□□□ 0.33
Nup85Q8R480 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.14■□□□□ 0.33
Nup85Q8R480 Gm18101-201ENSMUST00000215769 548 ntBASIC17.14■□□□□ 0.33
Nup85Q8R480 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nup85Q8R480 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Nup85Q8R480 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup85Q8R480 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup85Q8R480 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.14■□□□□ 0.33
Nup85Q8R480 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nup85Q8R480 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Nup85Q8R480 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nup85Q8R480 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nup85Q8R480 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nup85Q8R480 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms