Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC21.88■■□□□ 1.09
Ddx54Q8K4L0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 AC159114.1-201ENSMUST00000220349 266 ntBASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx54Q8K4L0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 AC174742.1-201ENSMUST00000218272 304 ntBASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx54Q8K4L0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ddx54Q8K4L0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Gm7222-201ENSMUST00000117512 906 ntBASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Gm4459-201ENSMUST00000118750 468 ntBASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Mir8117-201ENSMUST00000184773 107 ntBASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Gm27321-201ENSMUST00000185021 205 ntBASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx54Q8K4L0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx54Q8K4L0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx54Q8K4L0 Gm44872-201ENSMUST00000207864 420 ntBASIC21.83■■□□□ 1.09
Ddx54Q8K4L0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx54Q8K4L0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx54Q8K4L0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx54Q8K4L0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx54Q8K4L0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx54Q8K4L0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx54Q8K4L0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx54Q8K4L0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Ddx54Q8K4L0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 AC114585.2-202ENSMUST00000228094 426 ntBASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx54Q8K4L0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms