Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Gm18101-201ENSMUST00000215769 548 ntBASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn1Q8K0T0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Gm13216-201ENSMUST00000117145 591 ntBASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn1Q8K0T0 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Gm21559-201ENSMUST00000220638 855 ntBASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Gm8587-201ENSMUST00000076538 843 ntBASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn1Q8K0T0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Gm13836-201ENSMUST00000121159 501 ntBASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Gm27389-201ENSMUST00000183622 195 ntBASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Gm18115-201ENSMUST00000221209 621 ntBASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn1Q8K0T0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn1Q8K0T0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn1Q8K0T0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rtn1Q8K0T0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn1Q8K0T0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn1Q8K0T0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn1Q8K0T0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn1Q8K0T0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Rtn1Q8K0T0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms