Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Gm18958-201ENSMUST00000174258 762 ntBASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Gm7791-201ENSMUST00000219066 539 ntBASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox30Q8CGW4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sox30Q8CGW4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox30Q8CGW4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox30Q8CGW4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox30Q8CGW4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sox30Q8CGW4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox30Q8CGW4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox30Q8CGW4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox30Q8CGW4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox30Q8CGW4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox30Q8CGW4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Actl10-202ENSMUST00000226583 1501 ntBASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox30Q8CGW4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Gm13186-201ENSMUST00000118031 316 ntBASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox30Q8CGW4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sox30Q8CGW4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sox30Q8CGW4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox30Q8CGW4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.24■□□□□ 0.51
Sox30Q8CGW4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox30Q8CGW4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Sox30Q8CGW4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox30Q8CGW4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms