Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Uba3Q8C878 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uba3Q8C878 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Uba3Q8C878 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Uba3Q8C878 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Gm27389-201ENSMUST00000183622 195 ntBASIC17.62■□□□□ 0.41
Uba3Q8C878 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Uba3Q8C878 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Uba3Q8C878 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Uba3Q8C878 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.61■□□□□ 0.41
Uba3Q8C878 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba3Q8C878 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba3Q8C878 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Uba3Q8C878 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba3Q8C878 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Uba3Q8C878 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Uba3Q8C878 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba3Q8C878 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.61■□□□□ 0.41
Uba3Q8C878 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba3Q8C878 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba3Q8C878 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Uba3Q8C878 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Uba3Q8C878 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba3Q8C878 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Uba3Q8C878 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.6■□□□□ 0.41
Uba3Q8C878 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.6■□□□□ 0.41
Uba3Q8C878 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.6■□□□□ 0.41
Uba3Q8C878 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Uba3Q8C878 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Uba3Q8C878 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Gm10013-201ENSMUST00000106074 672 ntBASIC17.59■□□□□ 0.41
Uba3Q8C878 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.59■□□□□ 0.41
Uba3Q8C878 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.59■□□□□ 0.41
Uba3Q8C878 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.59■□□□□ 0.41
Uba3Q8C878 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Uba3Q8C878 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Uba3Q8C878 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Uba3Q8C878 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Uba3Q8C878 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Uba3Q8C878 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Uba3Q8C878 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms