Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Gm6443-201ENSMUST00000203599 874 ntBASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc187Q8C5V8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Gm18195-201ENSMUST00000207604 706 ntBASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Rps4l-201ENSMUST00000071745 943 ntBASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc187Q8C5V8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Gm43514-201ENSMUST00000198852 424 ntBASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc187Q8C5V8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc187Q8C5V8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Gm18733-201ENSMUST00000173950 856 ntBASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Gm6296-201ENSMUST00000222599 943 ntBASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc187Q8C5V8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc187Q8C5V8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc187Q8C5V8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc187Q8C5V8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc187Q8C5V8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc187Q8C5V8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc187Q8C5V8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.61■□□□□ 0.25
Ccdc187Q8C5V8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc187Q8C5V8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms