Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn3bQ8BHK2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn3bQ8BHK2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.61■□□□□ 0.09
Scn3bQ8BHK2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn3bQ8BHK2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scn3bQ8BHK2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Gm44549-201ENSMUST00000208351 577 ntBASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scn3bQ8BHK2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Gm7291-201ENSMUST00000199147 382 ntBASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Gm10493-201ENSMUST00000097270 612 ntBASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Scn3bQ8BHK2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Scn3bQ8BHK2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn3bQ8BHK2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Scn3bQ8BHK2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn3bQ8BHK2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Mir6349-201ENSMUST00000184059 97 ntBASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Gm6365-201ENSMUST00000054711 744 ntBASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn3bQ8BHK2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms