Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Usp8Q80U87 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Usp8Q80U87 Gm24841-201ENSMUST00000158676 357 ntBASIC16.79■□□□□ 0.28
Usp8Q80U87 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.79■□□□□ 0.28
Usp8Q80U87 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.79■□□□□ 0.28
Usp8Q80U87 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp8Q80U87 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.78■□□□□ 0.28
Usp8Q80U87 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Usp8Q80U87 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Usp8Q80U87 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp8Q80U87 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.78■□□□□ 0.28
Usp8Q80U87 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.77■□□□□ 0.28
Usp8Q80U87 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.77■□□□□ 0.28
Usp8Q80U87 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Usp8Q80U87 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp8Q80U87 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Usp8Q80U87 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.77■□□□□ 0.28
Usp8Q80U87 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Usp8Q80U87 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp8Q80U87 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp8Q80U87 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp8Q80U87 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Usp8Q80U87 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Usp8Q80U87 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp8Q80U87 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Usp8Q80U87 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.76■□□□□ 0.27
Usp8Q80U87 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp8Q80U87 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Usp8Q80U87 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Usp8Q80U87 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Usp8Q80U87 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms