Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Flg-201ENSMUST00000050758 1488 ntBASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav8d-1Q5R1H8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Gm20049-201ENSMUST00000219950 730 ntBASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav8d-1Q5R1H8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav8d-1Q5R1H8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms