Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim80Q3V061 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Trim80Q3V061 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.32■□□□□ 0.36
Trim80Q3V061 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim80Q3V061 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim80Q3V061 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim80Q3V061 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim80Q3V061 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim80Q3V061 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim80Q3V061 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim80Q3V061 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trim80Q3V061 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim80Q3V061 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim80Q3V061 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim80Q3V061 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trim80Q3V061 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim80Q3V061 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Trim80Q3V061 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.3■□□□□ 0.36
Trim80Q3V061 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim80Q3V061 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim80Q3V061 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim80Q3V061 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim80Q3V061 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim80Q3V061 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.29■□□□□ 0.36
Trim80Q3V061 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim80Q3V061 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trim80Q3V061 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim80Q3V061 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim80Q3V061 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Mir1199-201ENSMUST00000117015 119 ntBASIC17.29■□□□□ 0.36
Trim80Q3V061 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.29■□□□□ 0.36
Trim80Q3V061 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim80Q3V061 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim80Q3V061 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim80Q3V061 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim80Q3V061 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trim80Q3V061 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Gm11643-201ENSMUST00000119578 864 ntBASIC17.28■□□□□ 0.36
Trim80Q3V061 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim80Q3V061 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.28■□□□□ 0.36
Trim80Q3V061 Gm10698-201ENSMUST00000182663 604 ntBASIC17.28■□□□□ 0.36
Trim80Q3V061 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Trim80Q3V061 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim80Q3V061 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms