Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cks1brtQ3UNC9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cks1brtQ3UNC9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Gm27801-201ENSMUST00000184174 223 ntBASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1brtQ3UNC9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms