Protein–RNA interactions for Protein: P51612

Xpc, DNA repair protein complementing XP-C cells homolog, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XpcP51612 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XpcP51612 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XpcP51612 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XpcP51612 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
XpcP51612 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.34■□□□□ 0.85
XpcP51612 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XpcP51612 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
XpcP51612 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
XpcP51612 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.34■□□□□ 0.85
XpcP51612 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
XpcP51612 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XpcP51612 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
XpcP51612 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XpcP51612 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XpcP51612 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XpcP51612 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XpcP51612 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.33■□□□□ 0.85
XpcP51612 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.33■□□□□ 0.85
XpcP51612 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
XpcP51612 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.33■□□□□ 0.85
XpcP51612 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XpcP51612 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XpcP51612 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
XpcP51612 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
XpcP51612 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
XpcP51612 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
XpcP51612 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
XpcP51612 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XpcP51612 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XpcP51612 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
XpcP51612 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XpcP51612 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
XpcP51612 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.32■□□□□ 0.84
XpcP51612 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.32■□□□□ 0.84
XpcP51612 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.32■□□□□ 0.84
XpcP51612 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XpcP51612 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.32■□□□□ 0.84
XpcP51612 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XpcP51612 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XpcP51612 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XpcP51612 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.32■□□□□ 0.84
XpcP51612 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
XpcP51612 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XpcP51612 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.31■□□□□ 0.84
XpcP51612 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
XpcP51612 Mir5126-201ENSMUST00000175513 77 ntBASIC20.31■□□□□ 0.84
XpcP51612 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.31■□□□□ 0.84
XpcP51612 Gm42790-201ENSMUST00000201268 969 ntBASIC20.31■□□□□ 0.84
XpcP51612 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.31■□□□□ 0.84
XpcP51612 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
XpcP51612 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
XpcP51612 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.31■□□□□ 0.84
XpcP51612 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
XpcP51612 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XpcP51612 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XpcP51612 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
XpcP51612 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
XpcP51612 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
XpcP51612 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
XpcP51612 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
XpcP51612 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
XpcP51612 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 Gm27867-201ENSMUST00000184778 125 ntBASIC20.3■□□□□ 0.84
XpcP51612 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.3■□□□□ 0.84
XpcP51612 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.3■□□□□ 0.84
XpcP51612 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
XpcP51612 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
XpcP51612 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
XpcP51612 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Gm13186-201ENSMUST00000118031 316 ntBASIC20.29■□□□□ 0.84
XpcP51612 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.29■□□□□ 0.84
XpcP51612 Auts2-212ENSMUST00000178555 309 ntBASIC20.29■□□□□ 0.84
XpcP51612 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
XpcP51612 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
XpcP51612 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.29■□□□□ 0.84
XpcP51612 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
XpcP51612 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.29■□□□□ 0.84
XpcP51612 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
XpcP51612 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XpcP51612 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms