Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Foxa1P35582 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Foxa1P35582 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.47■□□□□ 0.07
Foxa1P35582 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.47■□□□□ 0.07
Foxa1P35582 Gm13186-201ENSMUST00000118031 316 ntBASIC15.47■□□□□ 0.07
Foxa1P35582 Gm22697-201ENSMUST00000175194 63 ntBASIC15.47■□□□□ 0.07
Foxa1P35582 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Foxa1P35582 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.47■□□□□ 0.07
Foxa1P35582 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Foxa1P35582 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Phf7-203ENSMUST00000226565 1971 ntBASIC15.47■□□□□ 0.07
Foxa1P35582 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.47■□□□□ 0.07
Foxa1P35582 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Foxa1P35582 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.46■□□□□ 0.07
Foxa1P35582 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Foxa1P35582 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.46■□□□□ 0.07
Foxa1P35582 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.46■□□□□ 0.07
Foxa1P35582 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.46■□□□□ 0.07
Foxa1P35582 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Gm13836-201ENSMUST00000121159 501 ntBASIC15.46■□□□□ 0.07
Foxa1P35582 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Foxa1P35582 Gm18101-201ENSMUST00000215769 548 ntBASIC15.46■□□□□ 0.07
Foxa1P35582 Gm18032-201ENSMUST00000222541 538 ntBASIC15.46■□□□□ 0.07
Foxa1P35582 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.46■□□□□ 0.07
Foxa1P35582 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Foxa1P35582 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Foxa1P35582 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Foxa1P35582 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Foxa1P35582 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Foxa1P35582 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Foxa1P35582 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Foxa1P35582 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Foxa1P35582 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Foxa1P35582 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Foxa1P35582 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxa1P35582 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxa1P35582 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Foxa1P35582 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxa1P35582 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Foxa1P35582 Gm26039-201ENSMUST00000158152 144 ntBASIC15.45■□□□□ 0.06
Foxa1P35582 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.45■□□□□ 0.06
Foxa1P35582 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxa1P35582 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
Foxa1P35582 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Foxa1P35582 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.45■□□□□ 0.06
Foxa1P35582 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Foxa1P35582 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.45■□□□□ 0.06
Foxa1P35582 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxa1P35582 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxa1P35582 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxa1P35582 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxa1P35582 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.44■□□□□ 0.06
Foxa1P35582 Gm27389-201ENSMUST00000183622 195 ntBASIC15.44■□□□□ 0.06
Foxa1P35582 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxa1P35582 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxa1P35582 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxa1P35582 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Foxa1P35582 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxa1P35582 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Foxa1P35582 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxa1P35582 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Foxa1P35582 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Foxa1P35582 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
Foxa1P35582 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.43■□□□□ 0.06
Foxa1P35582 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.43■□□□□ 0.06
Foxa1P35582 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Foxa1P35582 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms