Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cbx3P23198 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.28■□□□□ 0.04
Cbx3P23198 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Cbx3P23198 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cbx3P23198 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.28■□□□□ 0.04
Cbx3P23198 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.28■□□□□ 0.04
Cbx3P23198 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cbx3P23198 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Cbx3P23198 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.27■□□□□ 0.04
Cbx3P23198 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cbx3P23198 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.27■□□□□ 0.03
Cbx3P23198 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.27■□□□□ 0.03
Cbx3P23198 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.27■□□□□ 0.03
Cbx3P23198 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cbx3P23198 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cbx3P23198 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cbx3P23198 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.26■□□□□ 0.03
Cbx3P23198 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.26■□□□□ 0.03
Cbx3P23198 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cbx3P23198 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.26■□□□□ 0.03
Cbx3P23198 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.26■□□□□ 0.03
Cbx3P23198 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cbx3P23198 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cbx3P23198 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cbx3P23198 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.25■□□□□ 0.03
Cbx3P23198 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cbx3P23198 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cbx3P23198 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cbx3P23198 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms