Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdx1P18111 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdx1P18111 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdx1P18111 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdx1P18111 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdx1P18111 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdx1P18111 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdx1P18111 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cdx1P18111 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cdx1P18111 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cdx1P18111 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Cdx1P18111 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cdx1P18111 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Cdx1P18111 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx1P18111 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cdx1P18111 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdx1P18111 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdx1P18111 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdx1P18111 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.51□□□□□ -0.25
Cdx1P18111 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdx1P18111 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdx1P18111 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx1P18111 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.51□□□□□ -0.25
Cdx1P18111 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Cdx1P18111 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdx1P18111 Tgds-204ENSMUST00000228543 1594 ntBASIC13.5□□□□□ -0.25
Cdx1P18111 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdx1P18111 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Cdx1P18111 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.5□□□□□ -0.25
Cdx1P18111 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdx1P18111 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.5□□□□□ -0.25
Cdx1P18111 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.5□□□□□ -0.25
Cdx1P18111 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx1P18111 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdx1P18111 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdx1P18111 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdx1P18111 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdx1P18111 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdx1P18111 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdx1P18111 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx1P18111 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdx1P18111 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cdx1P18111 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms