Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Becn1O88597 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Becn1O88597 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Becn1O88597 Gm13148-201ENSMUST00000118892 745 ntBASIC19.2■□□□□ 0.66
Becn1O88597 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Becn1O88597 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Becn1O88597 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Becn1O88597 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Becn1O88597 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Becn1O88597 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Becn1O88597 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Becn1O88597 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.19■□□□□ 0.66
Becn1O88597 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Becn1O88597 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Becn1O88597 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Becn1O88597 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Becn1O88597 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Becn1O88597 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.19■□□□□ 0.66
Becn1O88597 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Becn1O88597 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Becn1O88597 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Becn1O88597 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Becn1O88597 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Becn1O88597 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.19■□□□□ 0.66
Becn1O88597 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Becn1O88597 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.18■□□□□ 0.66
Becn1O88597 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Becn1O88597 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Becn1O88597 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Becn1O88597 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.18■□□□□ 0.66
Becn1O88597 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Becn1O88597 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.18■□□□□ 0.66
Becn1O88597 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Becn1O88597 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.18■□□□□ 0.66
Becn1O88597 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.18■□□□□ 0.66
Becn1O88597 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Becn1O88597 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Becn1O88597 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.17■□□□□ 0.66
Becn1O88597 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Becn1O88597 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Becn1O88597 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Becn1O88597 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Becn1O88597 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.16■□□□□ 0.66
Becn1O88597 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Becn1O88597 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Becn1O88597 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Becn1O88597 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.15■□□□□ 0.66
Becn1O88597 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.15■□□□□ 0.66
Becn1O88597 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.15■□□□□ 0.66
Becn1O88597 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Becn1O88597 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Becn1O88597 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.15■□□□□ 0.66
Becn1O88597 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Becn1O88597 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Becn1O88597 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Becn1O88597 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms