Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm3727J3QM54 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Gm3727J3QM54 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.27□□□□□ -0.12
Gm3727J3QM54 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Gm3727J3QM54 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.27□□□□□ -0.13
Gm3727J3QM54 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Gm3727J3QM54 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.26□□□□□ -0.13
Gm3727J3QM54 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.26□□□□□ -0.13
Gm3727J3QM54 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm3727J3QM54 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Gm3727J3QM54 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.25□□□□□ -0.13
Gm3727J3QM54 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Gm6139-201ENSMUST00000079261 882 ntBASIC14.25□□□□□ -0.13
Gm3727J3QM54 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gm3727J3QM54 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3727J3QM54 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3727J3QM54 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3727J3QM54 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.24□□□□□ -0.13
Gm3727J3QM54 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3727J3QM54 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3727J3QM54 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3727J3QM54 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms