Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9d-1A0A075B699 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9d-1A0A075B699 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9d-1A0A075B699 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav9d-1A0A075B699 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms