Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Sec61a2Q9JLR1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Sec61a2Q9JLR1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec61a2Q9JLR1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec61a2Q9JLR1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sec61a2Q9JLR1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sec61a2Q9JLR1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Sec61a2Q9JLR1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sec61a2Q9JLR1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec61a2Q9JLR1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sec61a2Q9JLR1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sec61a2Q9JLR1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sec61a2Q9JLR1 Gm6821-201ENSMUST00000107540 542 ntBASIC20.97■□□□□ 0.95
Sec61a2Q9JLR1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sec61a2Q9JLR1 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.97■□□□□ 0.95
Sec61a2Q9JLR1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec61a2Q9JLR1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.96■□□□□ 0.95
Sec61a2Q9JLR1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Sec61a2Q9JLR1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec61a2Q9JLR1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.96■□□□□ 0.95
Sec61a2Q9JLR1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sec61a2Q9JLR1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec61a2Q9JLR1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec61a2Q9JLR1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec61a2Q9JLR1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Sec61a2Q9JLR1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec61a2Q9JLR1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Sec61a2Q9JLR1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sec61a2Q9JLR1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Sec61a2Q9JLR1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Sec61a2Q9JLR1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec61a2Q9JLR1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Sec61a2Q9JLR1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec61a2Q9JLR1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec61a2Q9JLR1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec61a2Q9JLR1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec61a2Q9JLR1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sec61a2Q9JLR1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec61a2Q9JLR1 Gm30023-201ENSMUST00000197970 889 ntBASIC20.92■□□□□ 0.94
Sec61a2Q9JLR1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sec61a2Q9JLR1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sec61a2Q9JLR1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.91■□□□□ 0.94
Sec61a2Q9JLR1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.91■□□□□ 0.94
Sec61a2Q9JLR1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Sec61a2Q9JLR1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec61a2Q9JLR1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec61a2Q9JLR1 Nkain2-201ENSMUST00000092602 558 ntBASIC20.9■□□□□ 0.94
Sec61a2Q9JLR1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sec61a2Q9JLR1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec61a2Q9JLR1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Sec61a2Q9JLR1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Sec61a2Q9JLR1 Gm8503-201ENSMUST00000118131 455 ntBASIC20.89■□□□□ 0.93
Sec61a2Q9JLR1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sec61a2Q9JLR1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sec61a2Q9JLR1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Sec61a2Q9JLR1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sec61a2Q9JLR1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sec61a2Q9JLR1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sec61a2Q9JLR1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sec61a2Q9JLR1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sec61a2Q9JLR1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.88■□□□□ 0.93
Sec61a2Q9JLR1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sec61a2Q9JLR1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Sec61a2Q9JLR1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.87■□□□□ 0.93
Sec61a2Q9JLR1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sec61a2Q9JLR1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Sec61a2Q9JLR1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sec61a2Q9JLR1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.86■□□□□ 0.93
Sec61a2Q9JLR1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.86■□□□□ 0.93
Sec61a2Q9JLR1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sec61a2Q9JLR1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.85■□□□□ 0.93
Sec61a2Q9JLR1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sec61a2Q9JLR1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sec61a2Q9JLR1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sec61a2Q9JLR1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
Sec61a2Q9JLR1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sec61a2Q9JLR1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sec61a2Q9JLR1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sec61a2Q9JLR1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.83■□□□□ 0.93
Sec61a2Q9JLR1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Sec61a2Q9JLR1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Sec61a2Q9JLR1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sec61a2Q9JLR1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sec61a2Q9JLR1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sec61a2Q9JLR1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sec61a2Q9JLR1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sec61a2Q9JLR1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sec61a2Q9JLR1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sec61a2Q9JLR1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sec61a2Q9JLR1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Sec61a2Q9JLR1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.81■□□□□ 0.92
Sec61a2Q9JLR1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sec61a2Q9JLR1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sec61a2Q9JLR1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sec61a2Q9JLR1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.8■□□□□ 0.92
Sec61a2Q9JLR1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sec61a2Q9JLR1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sec61a2Q9JLR1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.79■□□□□ 0.92
Sec61a2Q9JLR1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
Sec61a2Q9JLR1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms