Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ndc80Q9D0F1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ndc80Q9D0F1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ndc80Q9D0F1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ndc80Q9D0F1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ndc80Q9D0F1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ndc80Q9D0F1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ndc80Q9D0F1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ndc80Q9D0F1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ndc80Q9D0F1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ndc80Q9D0F1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Ndc80Q9D0F1 Gm30023-201ENSMUST00000197970 889 ntBASIC23.8■■□□□ 1.4
Ndc80Q9D0F1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ndc80Q9D0F1 Nkain2-201ENSMUST00000092602 558 ntBASIC23.79■■□□□ 1.4
Ndc80Q9D0F1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ndc80Q9D0F1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
Ndc80Q9D0F1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc80Q9D0F1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc80Q9D0F1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
Ndc80Q9D0F1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ndc80Q9D0F1 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.77■■□□□ 1.4
Ndc80Q9D0F1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ndc80Q9D0F1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ndc80Q9D0F1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
Ndc80Q9D0F1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ndc80Q9D0F1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.76■■□□□ 1.39
Ndc80Q9D0F1 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.76■■□□□ 1.39
Ndc80Q9D0F1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ndc80Q9D0F1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
Ndc80Q9D0F1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ndc80Q9D0F1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ndc80Q9D0F1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.73■■□□□ 1.39
Ndc80Q9D0F1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Ndc80Q9D0F1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ndc80Q9D0F1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ndc80Q9D0F1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ndc80Q9D0F1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ndc80Q9D0F1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ndc80Q9D0F1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ndc80Q9D0F1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ndc80Q9D0F1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ndc80Q9D0F1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ndc80Q9D0F1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Ndc80Q9D0F1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Ndc80Q9D0F1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.69■■□□□ 1.38
Ndc80Q9D0F1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.69■■□□□ 1.38
Ndc80Q9D0F1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ndc80Q9D0F1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ndc80Q9D0F1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ndc80Q9D0F1 Gm6821-201ENSMUST00000107540 542 ntBASIC23.68■■□□□ 1.38
Ndc80Q9D0F1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
Ndc80Q9D0F1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ndc80Q9D0F1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.68■■□□□ 1.38
Ndc80Q9D0F1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ndc80Q9D0F1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ndc80Q9D0F1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ndc80Q9D0F1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ndc80Q9D0F1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ndc80Q9D0F1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ndc80Q9D0F1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ndc80Q9D0F1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Ndc80Q9D0F1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.64■■□□□ 1.37
Ndc80Q9D0F1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ndc80Q9D0F1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ndc80Q9D0F1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ndc80Q9D0F1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ndc80Q9D0F1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ndc80Q9D0F1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ndc80Q9D0F1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
Ndc80Q9D0F1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.62■■□□□ 1.37
Ndc80Q9D0F1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ndc80Q9D0F1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ndc80Q9D0F1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ndc80Q9D0F1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.6■■□□□ 1.37
Ndc80Q9D0F1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ndc80Q9D0F1 Gm8503-201ENSMUST00000118131 455 ntBASIC23.6■■□□□ 1.37
Ndc80Q9D0F1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Ndc80Q9D0F1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.59■■□□□ 1.37
Ndc80Q9D0F1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Ndc80Q9D0F1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ndc80Q9D0F1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ndc80Q9D0F1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.58■■□□□ 1.37
Ndc80Q9D0F1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ndc80Q9D0F1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Ndc80Q9D0F1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.56■■□□□ 1.36
Ndc80Q9D0F1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ndc80Q9D0F1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.55■■□□□ 1.36
Ndc80Q9D0F1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Ndc80Q9D0F1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ndc80Q9D0F1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
Ndc80Q9D0F1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ndc80Q9D0F1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ndc80Q9D0F1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ndc80Q9D0F1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ndc80Q9D0F1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.53■■□□□ 1.36
Ndc80Q9D0F1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.52■■□□□ 1.36
Ndc80Q9D0F1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ndc80Q9D0F1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ndc80Q9D0F1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.52■■□□□ 1.36
Ndc80Q9D0F1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.52■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms