Protein–RNA interactions for Protein: Q9CR22

Tmem42, Transmembrane protein 42, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem42Q9CR22 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem42Q9CR22 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem42Q9CR22 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Tmem42Q9CR22 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tmem42Q9CR22 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem42Q9CR22 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Tmem42Q9CR22 Gm30023-201ENSMUST00000197970 889 ntBASIC20.51■□□□□ 0.87
Tmem42Q9CR22 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem42Q9CR22 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.5■□□□□ 0.87
Tmem42Q9CR22 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem42Q9CR22 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.5■□□□□ 0.87
Tmem42Q9CR22 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem42Q9CR22 Gm45855-201ENSMUST00000212546 880 ntBASIC20.5■□□□□ 0.87
Tmem42Q9CR22 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmem42Q9CR22 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmem42Q9CR22 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.48■□□□□ 0.87
Tmem42Q9CR22 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem42Q9CR22 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Tmem42Q9CR22 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem42Q9CR22 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tmem42Q9CR22 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tmem42Q9CR22 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.47■□□□□ 0.87
Tmem42Q9CR22 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.47■□□□□ 0.87
Tmem42Q9CR22 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tmem42Q9CR22 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem42Q9CR22 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem42Q9CR22 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem42Q9CR22 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem42Q9CR22 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem42Q9CR22 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Tmem42Q9CR22 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tmem42Q9CR22 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tmem42Q9CR22 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tmem42Q9CR22 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tmem42Q9CR22 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tmem42Q9CR22 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tmem42Q9CR22 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tmem42Q9CR22 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmem42Q9CR22 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tmem42Q9CR22 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmem42Q9CR22 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmem42Q9CR22 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Tmem42Q9CR22 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tmem42Q9CR22 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem42Q9CR22 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem42Q9CR22 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Tmem42Q9CR22 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem42Q9CR22 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tmem42Q9CR22 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmem42Q9CR22 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tmem42Q9CR22 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tmem42Q9CR22 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tmem42Q9CR22 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tmem42Q9CR22 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.39■□□□□ 0.85
Tmem42Q9CR22 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.39■□□□□ 0.85
Tmem42Q9CR22 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem42Q9CR22 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tmem42Q9CR22 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem42Q9CR22 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Tmem42Q9CR22 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Tmem42Q9CR22 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem42Q9CR22 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem42Q9CR22 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem42Q9CR22 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem42Q9CR22 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem42Q9CR22 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tmem42Q9CR22 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem42Q9CR22 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.37■□□□□ 0.85
Tmem42Q9CR22 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem42Q9CR22 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem42Q9CR22 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem42Q9CR22 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem42Q9CR22 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.34■□□□□ 0.85
Tmem42Q9CR22 Particl-201ENSMUST00000205370 1560 ntBASIC20.34■□□□□ 0.85
Tmem42Q9CR22 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Tmem42Q9CR22 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem42Q9CR22 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem42Q9CR22 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem42Q9CR22 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem42Q9CR22 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.33■□□□□ 0.85
Tmem42Q9CR22 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tmem42Q9CR22 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem42Q9CR22 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem42Q9CR22 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem42Q9CR22 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tmem42Q9CR22 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Tmem42Q9CR22 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem42Q9CR22 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem42Q9CR22 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem42Q9CR22 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem42Q9CR22 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tmem42Q9CR22 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tmem42Q9CR22 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmem42Q9CR22 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmem42Q9CR22 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmem42Q9CR22 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tmem42Q9CR22 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Tmem42Q9CR22 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tmem42Q9CR22 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Tmem42Q9CR22 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms