Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sec61bQ9CQS8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.65□□□□□ -0.38
Sec61bQ9CQS8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC12.65□□□□□ -0.38
Sec61bQ9CQS8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sec61bQ9CQS8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Gm11175-201ENSMUST00000116172 543 ntBASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sec61bQ9CQS8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Gm4799-201ENSMUST00000095396 657 ntBASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sec61bQ9CQS8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61bQ9CQS8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61bQ9CQS8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61bQ9CQS8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sec61bQ9CQS8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sec61bQ9CQS8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Gm11687-201ENSMUST00000118911 886 ntBASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Sec61bQ9CQS8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sec61bQ9CQS8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.59□□□□□ -0.39
Sec61bQ9CQS8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61bQ9CQS8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61bQ9CQS8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC12.59□□□□□ -0.39
Sec61bQ9CQS8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 AC154454.1-201ENSMUST00000225253 216 ntBASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sec61bQ9CQS8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61bQ9CQS8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61bQ9CQS8 Cap2-205ENSMUST00000225824 1634 ntBASIC12.57□□□□□ -0.4
Sec61bQ9CQS8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61bQ9CQS8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 Pkd1-207ENSMUST00000228550 1050 ntBASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 Gm9806-201ENSMUST00000051080 552 ntBASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61bQ9CQS8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sec61bQ9CQS8 Scarna2-201ENSMUST00000157560 414 ntBASIC12.55□□□□□ -0.4
Sec61bQ9CQS8 Mir3960-201ENSMUST00000198213 73 ntBASIC12.55□□□□□ -0.4
Sec61bQ9CQS8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sec61bQ9CQS8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Gm9905-201ENSMUST00000065740 1845 ntBASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC12.53□□□□□ -0.4
Sec61bQ9CQS8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61bQ9CQS8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC12.52□□□□□ -0.4
Sec61bQ9CQS8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61bQ9CQS8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61bQ9CQS8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sec61bQ9CQS8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC12.52□□□□□ -0.41
Sec61bQ9CQS8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sec61bQ9CQS8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC12.52□□□□□ -0.41
Sec61bQ9CQS8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61bQ9CQS8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61bQ9CQS8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms