Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Homer3Q99JP6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Homer3Q99JP6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Homer3Q99JP6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Homer3Q99JP6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Homer3Q99JP6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Homer3Q99JP6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Homer3Q99JP6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Homer3Q99JP6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Homer3Q99JP6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Homer3Q99JP6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Homer3Q99JP6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.36■■□□□ 1.33
Homer3Q99JP6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Homer3Q99JP6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Homer3Q99JP6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Homer3Q99JP6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.35■■□□□ 1.33
Homer3Q99JP6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Homer3Q99JP6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Homer3Q99JP6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Homer3Q99JP6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Homer3Q99JP6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Homer3Q99JP6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Homer3Q99JP6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Homer3Q99JP6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Homer3Q99JP6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Homer3Q99JP6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Homer3Q99JP6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Homer3Q99JP6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Homer3Q99JP6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.32■■□□□ 1.32
Homer3Q99JP6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Homer3Q99JP6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Homer3Q99JP6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
Homer3Q99JP6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Homer3Q99JP6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.3■■□□□ 1.32
Homer3Q99JP6 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.3■■□□□ 1.32
Homer3Q99JP6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Homer3Q99JP6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Homer3Q99JP6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Homer3Q99JP6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Homer3Q99JP6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Homer3Q99JP6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Homer3Q99JP6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Homer3Q99JP6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Homer3Q99JP6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Homer3Q99JP6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Homer3Q99JP6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Homer3Q99JP6 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.27■■□□□ 1.32
Homer3Q99JP6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Homer3Q99JP6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Homer3Q99JP6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Homer3Q99JP6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Homer3Q99JP6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Homer3Q99JP6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Homer3Q99JP6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Homer3Q99JP6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Homer3Q99JP6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Homer3Q99JP6 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.24■■□□□ 1.31
Homer3Q99JP6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Homer3Q99JP6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.24■■□□□ 1.31
Homer3Q99JP6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Homer3Q99JP6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Homer3Q99JP6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Homer3Q99JP6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Homer3Q99JP6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Homer3Q99JP6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Homer3Q99JP6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Homer3Q99JP6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.22■■□□□ 1.31
Homer3Q99JP6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Homer3Q99JP6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Homer3Q99JP6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Homer3Q99JP6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Homer3Q99JP6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Homer3Q99JP6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Homer3Q99JP6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.2■■□□□ 1.3
Homer3Q99JP6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Homer3Q99JP6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.2■■□□□ 1.3
Homer3Q99JP6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Homer3Q99JP6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Homer3Q99JP6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Homer3Q99JP6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Homer3Q99JP6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.18■■□□□ 1.3
Homer3Q99JP6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Homer3Q99JP6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Homer3Q99JP6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Homer3Q99JP6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Homer3Q99JP6 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.15■■□□□ 1.3
Homer3Q99JP6 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.15■■□□□ 1.3
Homer3Q99JP6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Homer3Q99JP6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Homer3Q99JP6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Homer3Q99JP6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.14■■□□□ 1.29
Homer3Q99JP6 Particl-201ENSMUST00000205370 1560 ntBASIC23.14■■□□□ 1.29
Homer3Q99JP6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Homer3Q99JP6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Homer3Q99JP6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Homer3Q99JP6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.12■■□□□ 1.29
Homer3Q99JP6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Homer3Q99JP6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
Homer3Q99JP6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Homer3Q99JP6 Zfp131-205ENSMUST00000223812 663 ntBASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms