Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26,97■■□□□ 1,91
Smc1bQ920F6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26,96■■□□□ 1,91
Smc1bQ920F6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26,96■■□□□ 1,91
Smc1bQ920F6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26,96■■□□□ 1,91
Smc1bQ920F6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26,96■■□□□ 1,91
Smc1bQ920F6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26,96■■□□□ 1,91
Smc1bQ920F6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26,96■■□□□ 1,91
Smc1bQ920F6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26,95■■□□□ 1,9
Smc1bQ920F6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,95■■□□□ 1,9
Smc1bQ920F6 Fezf2-202ENSMUST00000224023 1917 ntBASIC26,94■■□□□ 1,9
Smc1bQ920F6 Particl-201ENSMUST00000205370 1560 ntBASIC26,94■■□□□ 1,9
Smc1bQ920F6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26,93■■□□□ 1,9
Smc1bQ920F6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26,92■■□□□ 1,9
Smc1bQ920F6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26,91■■□□□ 1,9
Smc1bQ920F6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26,91■■□□□ 1,9
Smc1bQ920F6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26,91■■□□□ 1,9
Smc1bQ920F6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26,9■■□□□ 1,9
Smc1bQ920F6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26,9■■□□□ 1,9
Smc1bQ920F6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26,9■■□□□ 1,9
Smc1bQ920F6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26,89■■□□□ 1,9
Smc1bQ920F6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26,89■■□□□ 1,9
Smc1bQ920F6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26,89■■□□□ 1,9
Smc1bQ920F6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26,89■■□□□ 1,9
Smc1bQ920F6 Gm12366-201ENSMUST00000121722 873 ntBASIC26,89■■□□□ 1,9
Smc1bQ920F6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26,89■■□□□ 1,9
Smc1bQ920F6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26,89■■□□□ 1,9
Smc1bQ920F6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26,89■■□□□ 1,9
Smc1bQ920F6 Gm5786-201ENSMUST00000085368 882 ntBASIC26,89■■□□□ 1,9
Smc1bQ920F6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26,89■■□□□ 1,89
Smc1bQ920F6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26,89■■□□□ 1,89
Smc1bQ920F6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26,88■■□□□ 1,89
Smc1bQ920F6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Smc1bQ920F6 Scarna2-201ENSMUST00000157560 414 ntBASIC26,88■■□□□ 1,89
Smc1bQ920F6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Smc1bQ920F6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Smc1bQ920F6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26,88■■□□□ 1,89
Smc1bQ920F6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26,87■■□□□ 1,89
Smc1bQ920F6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26,87■■□□□ 1,89
Smc1bQ920F6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26,87■■□□□ 1,89
Smc1bQ920F6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26,86■■□□□ 1,89
Smc1bQ920F6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26,86■■□□□ 1,89
Smc1bQ920F6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Smc1bQ920F6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Smc1bQ920F6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26,86■■□□□ 1,89
Smc1bQ920F6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26,85■■□□□ 1,89
Smc1bQ920F6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26,85■■□□□ 1,89
Smc1bQ920F6 Gm11687-201ENSMUST00000118911 886 ntBASIC26,85■■□□□ 1,89
Smc1bQ920F6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26,85■■□□□ 1,89
Smc1bQ920F6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26,85■■□□□ 1,89
Smc1bQ920F6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26,85■■□□□ 1,89
Smc1bQ920F6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26,85■■□□□ 1,89
Smc1bQ920F6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26,83■■□□□ 1,89
Smc1bQ920F6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26,83■■□□□ 1,89
Smc1bQ920F6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26,83■■□□□ 1,89
Smc1bQ920F6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26,83■■□□□ 1,89
Smc1bQ920F6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26,82■■□□□ 1,88
Smc1bQ920F6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26,82■■□□□ 1,88
Smc1bQ920F6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26,82■■□□□ 1,88
Smc1bQ920F6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26,81■■□□□ 1,88
Smc1bQ920F6 Gm9806-201ENSMUST00000051080 552 ntBASIC26,81■■□□□ 1,88
Smc1bQ920F6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26,81■■□□□ 1,88
Smc1bQ920F6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Smc1bQ920F6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26,79■■□□□ 1,88
Smc1bQ920F6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26,78■■□□□ 1,88
Smc1bQ920F6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26,78■■□□□ 1,88
Smc1bQ920F6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26,78■■□□□ 1,88
Smc1bQ920F6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26,78■■□□□ 1,88
Smc1bQ920F6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26,77■■□□□ 1,88
Smc1bQ920F6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26,77■■□□□ 1,88
Smc1bQ920F6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26,77■■□□□ 1,88
Smc1bQ920F6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26,77■■□□□ 1,88
Smc1bQ920F6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26,77■■□□□ 1,88
Smc1bQ920F6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26,77■■□□□ 1,88
Smc1bQ920F6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26,77■■□□□ 1,88
Smc1bQ920F6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26,76■■□□□ 1,88
Smc1bQ920F6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26,76■■□□□ 1,87
Smc1bQ920F6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26,76■■□□□ 1,87
Smc1bQ920F6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26,76■■□□□ 1,87
Smc1bQ920F6 Gm4799-201ENSMUST00000095396 657 ntBASIC26,76■■□□□ 1,87
Smc1bQ920F6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26,76■■□□□ 1,87
Smc1bQ920F6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26,75■■□□□ 1,87
Smc1bQ920F6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26,75■■□□□ 1,87
Smc1bQ920F6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26,75■■□□□ 1,87
Smc1bQ920F6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26,74■■□□□ 1,87
Smc1bQ920F6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26,74■■□□□ 1,87
Smc1bQ920F6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26,74■■□□□ 1,87
Smc1bQ920F6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Smc1bQ920F6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Smc1bQ920F6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26,73■■□□□ 1,87
Smc1bQ920F6 Gm30023-201ENSMUST00000197970 889 ntBASIC26,73■■□□□ 1,87
Smc1bQ920F6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Smc1bQ920F6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26,72■■□□□ 1,87
Smc1bQ920F6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26,72■■□□□ 1,87
Smc1bQ920F6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26,71■■□□□ 1,87
Smc1bQ920F6 Gm16437-201ENSMUST00000025669 507 ntBASIC26,71■■□□□ 1,87
Smc1bQ920F6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26,71■■□□□ 1,87
Smc1bQ920F6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26,7■■□□□ 1,87
Smc1bQ920F6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26,7■■□□□ 1,87
Smc1bQ920F6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26,7■■□□□ 1,86
Smc1bQ920F6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26,7■■□□□ 1,86
Retrieved 100 of 76,532 protein–RNA pairs in 13,4 ms