Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tram1Q91V04 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tram1Q91V04 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
Tram1Q91V04 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1Q91V04 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Tram1Q91V04 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tram1Q91V04 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1Q91V04 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tram1Q91V04 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1Q91V04 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1Q91V04 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1Q91V04 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1Q91V04 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1Q91V04 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tram1Q91V04 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tram1Q91V04 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tram1Q91V04 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Tram1Q91V04 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tram1Q91V04 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tram1Q91V04 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.14■□□□□ 0.81
Tram1Q91V04 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tram1Q91V04 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tram1Q91V04 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tram1Q91V04 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tram1Q91V04 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tram1Q91V04 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tram1Q91V04 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tram1Q91V04 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tram1Q91V04 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Tram1Q91V04 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tram1Q91V04 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tram1Q91V04 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Tram1Q91V04 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Tram1Q91V04 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.09■□□□□ 0.81
Tram1Q91V04 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tram1Q91V04 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tram1Q91V04 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tram1Q91V04 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tram1Q91V04 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tram1Q91V04 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tram1Q91V04 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tram1Q91V04 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tram1Q91V04 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tram1Q91V04 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tram1Q91V04 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Tram1Q91V04 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.07■□□□□ 0.8
Tram1Q91V04 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tram1Q91V04 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tram1Q91V04 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tram1Q91V04 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Tram1Q91V04 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tram1Q91V04 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tram1Q91V04 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tram1Q91V04 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Tram1Q91V04 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tram1Q91V04 Gm26115-201ENSMUST00000175605 87 ntBASIC20.05■□□□□ 0.8
Tram1Q91V04 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tram1Q91V04 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.04■□□□□ 0.8
Tram1Q91V04 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tram1Q91V04 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tram1Q91V04 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Tram1Q91V04 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1Q91V04 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1Q91V04 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1Q91V04 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tram1Q91V04 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1Q91V04 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.02■□□□□ 0.8
Tram1Q91V04 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tram1Q91V04 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tram1Q91V04 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tram1Q91V04 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tram1Q91V04 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20■□□□□ 0.79
Tram1Q91V04 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tram1Q91V04 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tram1Q91V04 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Tram1Q91V04 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tram1Q91V04 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tram1Q91V04 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1Q91V04 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1Q91V04 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Tram1Q91V04 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1Q91V04 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1Q91V04 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1Q91V04 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1Q91V04 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Tram1Q91V04 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Tram1Q91V04 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tram1Q91V04 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tram1Q91V04 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tram1Q91V04 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tram1Q91V04 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Tram1Q91V04 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1Q91V04 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.95■□□□□ 0.78
Tram1Q91V04 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1Q91V04 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1Q91V04 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1Q91V04 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1Q91V04 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1Q91V04 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tram1Q91V04 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms