Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
H1fooQ8VIK3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
H1fooQ8VIK3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
H1fooQ8VIK3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H1fooQ8VIK3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
H1fooQ8VIK3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
H1fooQ8VIK3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H1fooQ8VIK3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H1fooQ8VIK3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
H1fooQ8VIK3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H1fooQ8VIK3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.59■□□□□ 0.73
H1fooQ8VIK3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.59■□□□□ 0.73
H1fooQ8VIK3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H1fooQ8VIK3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.59■□□□□ 0.73
H1fooQ8VIK3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H1fooQ8VIK3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
H1fooQ8VIK3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.58■□□□□ 0.72
H1fooQ8VIK3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
H1fooQ8VIK3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
H1fooQ8VIK3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H1fooQ8VIK3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.55■□□□□ 0.72
H1fooQ8VIK3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H1fooQ8VIK3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H1fooQ8VIK3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H1fooQ8VIK3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H1fooQ8VIK3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
H1fooQ8VIK3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.54■□□□□ 0.72
H1fooQ8VIK3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H1fooQ8VIK3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H1fooQ8VIK3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H1fooQ8VIK3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H1fooQ8VIK3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H1fooQ8VIK3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
H1fooQ8VIK3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
H1fooQ8VIK3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H1fooQ8VIK3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
H1fooQ8VIK3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H1fooQ8VIK3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H1fooQ8VIK3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
H1fooQ8VIK3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H1fooQ8VIK3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.5■□□□□ 0.71
H1fooQ8VIK3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H1fooQ8VIK3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H1fooQ8VIK3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H1fooQ8VIK3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H1fooQ8VIK3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
H1fooQ8VIK3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
H1fooQ8VIK3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
H1fooQ8VIK3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Nkain2-201ENSMUST00000092602 558 ntBASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
H1fooQ8VIK3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
H1fooQ8VIK3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
H1fooQ8VIK3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H1fooQ8VIK3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H1fooQ8VIK3 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.44■□□□□ 0.7
H1fooQ8VIK3 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.44■□□□□ 0.7
H1fooQ8VIK3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
H1fooQ8VIK3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
H1fooQ8VIK3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H1fooQ8VIK3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H1fooQ8VIK3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H1fooQ8VIK3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H1fooQ8VIK3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
H1fooQ8VIK3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
H1fooQ8VIK3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 985.4 ms