Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retreg1dQ8VE91 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retreg1dQ8VE91 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retreg1dQ8VE91 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retreg1dQ8VE91 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retreg1dQ8VE91 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Retreg1dQ8VE91 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retreg1dQ8VE91 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retreg1dQ8VE91 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retreg1dQ8VE91 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retreg1dQ8VE91 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.18■■□□□ 1.3
Retreg1dQ8VE91 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retreg1dQ8VE91 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retreg1dQ8VE91 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retreg1dQ8VE91 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retreg1dQ8VE91 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Retreg1dQ8VE91 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retreg1dQ8VE91 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retreg1dQ8VE91 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Retreg1dQ8VE91 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Retreg1dQ8VE91 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retreg1dQ8VE91 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Retreg1dQ8VE91 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.12■■□□□ 1.29
Retreg1dQ8VE91 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.11■■□□□ 1.29
Retreg1dQ8VE91 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.1■■□□□ 1.29
Retreg1dQ8VE91 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retreg1dQ8VE91 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retreg1dQ8VE91 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retreg1dQ8VE91 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Retreg1dQ8VE91 Particl-201ENSMUST00000205370 1560 ntBASIC23.06■■□□□ 1.28
Retreg1dQ8VE91 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Retreg1dQ8VE91 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retreg1dQ8VE91 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retreg1dQ8VE91 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Retreg1dQ8VE91 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retreg1dQ8VE91 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.04■■□□□ 1.28
Retreg1dQ8VE91 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.04■■□□□ 1.28
Retreg1dQ8VE91 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.04■■□□□ 1.28
Retreg1dQ8VE91 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retreg1dQ8VE91 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Retreg1dQ8VE91 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retreg1dQ8VE91 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Retreg1dQ8VE91 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retreg1dQ8VE91 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Retreg1dQ8VE91 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Retreg1dQ8VE91 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.02■■□□□ 1.28
Retreg1dQ8VE91 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retreg1dQ8VE91 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retreg1dQ8VE91 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retreg1dQ8VE91 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23■■□□□ 1.27
Retreg1dQ8VE91 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
Retreg1dQ8VE91 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retreg1dQ8VE91 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retreg1dQ8VE91 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.99■■□□□ 1.27
Retreg1dQ8VE91 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Retreg1dQ8VE91 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.99■■□□□ 1.27
Retreg1dQ8VE91 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retreg1dQ8VE91 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Retreg1dQ8VE91 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retreg1dQ8VE91 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retreg1dQ8VE91 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retreg1dQ8VE91 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retreg1dQ8VE91 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retreg1dQ8VE91 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retreg1dQ8VE91 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Retreg1dQ8VE91 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.97■■□□□ 1.27
Retreg1dQ8VE91 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.97■■□□□ 1.27
Retreg1dQ8VE91 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retreg1dQ8VE91 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retreg1dQ8VE91 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Retreg1dQ8VE91 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retreg1dQ8VE91 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retreg1dQ8VE91 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retreg1dQ8VE91 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retreg1dQ8VE91 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Retreg1dQ8VE91 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retreg1dQ8VE91 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retreg1dQ8VE91 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Retreg1dQ8VE91 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retreg1dQ8VE91 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retreg1dQ8VE91 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.9■■□□□ 1.26
Retreg1dQ8VE91 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retreg1dQ8VE91 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retreg1dQ8VE91 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Retreg1dQ8VE91 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Retreg1dQ8VE91 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retreg1dQ8VE91 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retreg1dQ8VE91 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retreg1dQ8VE91 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.88■■□□□ 1.25
Retreg1dQ8VE91 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Retreg1dQ8VE91 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retreg1dQ8VE91 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Retreg1dQ8VE91 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.87■■□□□ 1.25
Retreg1dQ8VE91 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Retreg1dQ8VE91 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retreg1dQ8VE91 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Retreg1dQ8VE91 Gm6311-201ENSMUST00000073790 878 ntBASIC22.86■■□□□ 1.25
Retreg1dQ8VE91 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retreg1dQ8VE91 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retreg1dQ8VE91 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms