Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Atp2a1Q8R429 Mir6538-201ENSMUST00000183713 110 ntBASIC26.49■■□□□ 1.83
Atp2a1Q8R429 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Atp2a1Q8R429 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Atp2a1Q8R429 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Atp2a1Q8R429 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Atp2a1Q8R429 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Atp2a1Q8R429 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Atp2a1Q8R429 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.45■■□□□ 1.82
Atp2a1Q8R429 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Atp2a1Q8R429 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.44■■□□□ 1.82
Atp2a1Q8R429 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Atp2a1Q8R429 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Atp2a1Q8R429 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Atp2a1Q8R429 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Atp2a1Q8R429 Gm6311-201ENSMUST00000073790 878 ntBASIC26.43■■□□□ 1.82
Atp2a1Q8R429 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.42■■□□□ 1.82
Atp2a1Q8R429 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Atp2a1Q8R429 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Atp2a1Q8R429 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Atp2a1Q8R429 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Atp2a1Q8R429 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Atp2a1Q8R429 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Atp2a1Q8R429 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Atp2a1Q8R429 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Atp2a1Q8R429 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
Atp2a1Q8R429 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Atp2a1Q8R429 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Atp2a1Q8R429 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.37■■□□□ 1.81
Atp2a1Q8R429 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Atp2a1Q8R429 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atp2a1Q8R429 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.35■■□□□ 1.81
Atp2a1Q8R429 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
Atp2a1Q8R429 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atp2a1Q8R429 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.35■■□□□ 1.81
Atp2a1Q8R429 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.35■■□□□ 1.81
Atp2a1Q8R429 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Atp2a1Q8R429 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Atp2a1Q8R429 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.34■■□□□ 1.81
Atp2a1Q8R429 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Atp2a1Q8R429 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Atp2a1Q8R429 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
Atp2a1Q8R429 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atp2a1Q8R429 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atp2a1Q8R429 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atp2a1Q8R429 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Atp2a1Q8R429 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Atp2a1Q8R429 Gm37136-201ENSMUST00000194368 194 ntBASIC26.29■■□□□ 1.8
Atp2a1Q8R429 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Atp2a1Q8R429 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Atp2a1Q8R429 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Atp2a1Q8R429 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Atp2a1Q8R429 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Atp2a1Q8R429 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp2a1Q8R429 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp2a1Q8R429 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp2a1Q8R429 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp2a1Q8R429 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Atp2a1Q8R429 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp2a1Q8R429 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp2a1Q8R429 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp2a1Q8R429 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.22■■□□□ 1.79
Atp2a1Q8R429 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
Atp2a1Q8R429 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atp2a1Q8R429 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.21■■□□□ 1.79
Atp2a1Q8R429 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atp2a1Q8R429 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atp2a1Q8R429 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Atp2a1Q8R429 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Atp2a1Q8R429 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atp2a1Q8R429 Gm4799-201ENSMUST00000095396 657 ntBASIC26.2■■□□□ 1.78
Atp2a1Q8R429 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atp2a1Q8R429 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Atp2a1Q8R429 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atp2a1Q8R429 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.19■■□□□ 1.78
Atp2a1Q8R429 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Atp2a1Q8R429 Cap2-205ENSMUST00000225824 1634 ntBASIC26.18■■□□□ 1.78
Atp2a1Q8R429 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Atp2a1Q8R429 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.18■■□□□ 1.78
Atp2a1Q8R429 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Atp2a1Q8R429 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Atp2a1Q8R429 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Atp2a1Q8R429 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.17■■□□□ 1.78
Atp2a1Q8R429 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Atp2a1Q8R429 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Atp2a1Q8R429 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Atp2a1Q8R429 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Atp2a1Q8R429 Mir3960-201ENSMUST00000198213 73 ntBASIC26.15■■□□□ 1.78
Atp2a1Q8R429 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Atp2a1Q8R429 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Atp2a1Q8R429 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Atp2a1Q8R429 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Atp2a1Q8R429 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.14■■□□□ 1.77
Atp2a1Q8R429 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.13■■□□□ 1.77
Atp2a1Q8R429 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Atp2a1Q8R429 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Atp2a1Q8R429 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Atp2a1Q8R429 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Atp2a1Q8R429 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Atp2a1Q8R429 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.12■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms