Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Clrn1Q8K445 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Clrn1Q8K445 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.17■■□□□ 1.14
Clrn1Q8K445 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.17■■□□□ 1.14
Clrn1Q8K445 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Clrn1Q8K445 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Clrn1Q8K445 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Clrn1Q8K445 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Clrn1Q8K445 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.15■■□□□ 1.14
Clrn1Q8K445 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Clrn1Q8K445 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.15■■□□□ 1.14
Clrn1Q8K445 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.15■■□□□ 1.14
Clrn1Q8K445 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Clrn1Q8K445 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Clrn1Q8K445 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.14■■□□□ 1.13
Clrn1Q8K445 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Clrn1Q8K445 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Clrn1Q8K445 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Clrn1Q8K445 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Clrn1Q8K445 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Clrn1Q8K445 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Clrn1Q8K445 Gm8503-201ENSMUST00000118131 455 ntBASIC22.12■■□□□ 1.13
Clrn1Q8K445 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.12■■□□□ 1.13
Clrn1Q8K445 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Clrn1Q8K445 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Clrn1Q8K445 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Clrn1Q8K445 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Clrn1Q8K445 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.11■■□□□ 1.13
Clrn1Q8K445 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Clrn1Q8K445 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Clrn1Q8K445 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.11■■□□□ 1.13
Clrn1Q8K445 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Clrn1Q8K445 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Clrn1Q8K445 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Clrn1Q8K445 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.09■■□□□ 1.13
Clrn1Q8K445 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Clrn1Q8K445 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Clrn1Q8K445 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Clrn1Q8K445 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Clrn1Q8K445 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Clrn1Q8K445 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Clrn1Q8K445 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Clrn1Q8K445 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Clrn1Q8K445 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Clrn1Q8K445 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Clrn1Q8K445 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.06■■□□□ 1.12
Clrn1Q8K445 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Clrn1Q8K445 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Clrn1Q8K445 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Clrn1Q8K445 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Clrn1Q8K445 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.04■■□□□ 1.12
Clrn1Q8K445 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Clrn1Q8K445 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Clrn1Q8K445 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Clrn1Q8K445 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Clrn1Q8K445 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.01■■□□□ 1.11
Clrn1Q8K445 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Clrn1Q8K445 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.01■■□□□ 1.11
Clrn1Q8K445 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22■■□□□ 1.11
Clrn1Q8K445 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Clrn1Q8K445 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Clrn1Q8K445 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22■■□□□ 1.11
Clrn1Q8K445 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Clrn1Q8K445 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Clrn1Q8K445 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Clrn1Q8K445 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Clrn1Q8K445 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Clrn1Q8K445 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Clrn1Q8K445 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Clrn1Q8K445 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Clrn1Q8K445 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Clrn1Q8K445 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Clrn1Q8K445 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Clrn1Q8K445 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Clrn1Q8K445 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.96■■□□□ 1.11
Clrn1Q8K445 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.96■■□□□ 1.11
Clrn1Q8K445 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.95■■□□□ 1.11
Clrn1Q8K445 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Clrn1Q8K445 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Clrn1Q8K445 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.95■■□□□ 1.1
Clrn1Q8K445 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Clrn1Q8K445 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Clrn1Q8K445 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Clrn1Q8K445 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Clrn1Q8K445 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Clrn1Q8K445 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Clrn1Q8K445 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Clrn1Q8K445 Particl-201ENSMUST00000205370 1560 ntBASIC21.92■■□□□ 1.1
Clrn1Q8K445 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Clrn1Q8K445 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.92■■□□□ 1.1
Clrn1Q8K445 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
Clrn1Q8K445 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clrn1Q8K445 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clrn1Q8K445 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Clrn1Q8K445 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clrn1Q8K445 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Clrn1Q8K445 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clrn1Q8K445 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clrn1Q8K445 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.89■■□□□ 1.1
Clrn1Q8K445 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms