Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Rsph6aQ8CDR2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rsph6aQ8CDR2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.36■■■□□ 2.61
Rsph6aQ8CDR2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rsph6aQ8CDR2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rsph6aQ8CDR2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rsph6aQ8CDR2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.33■■■□□ 2.61
Rsph6aQ8CDR2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
Rsph6aQ8CDR2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rsph6aQ8CDR2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rsph6aQ8CDR2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Rsph6aQ8CDR2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Rsph6aQ8CDR2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.29■■■□□ 2.6
Rsph6aQ8CDR2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
Rsph6aQ8CDR2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rsph6aQ8CDR2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
Rsph6aQ8CDR2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
Rsph6aQ8CDR2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Rsph6aQ8CDR2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Rsph6aQ8CDR2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rsph6aQ8CDR2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
Rsph6aQ8CDR2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rsph6aQ8CDR2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.25■■■□□ 2.59
Rsph6aQ8CDR2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rsph6aQ8CDR2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rsph6aQ8CDR2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.24■■■□□ 2.59
Rsph6aQ8CDR2 Gm37136-201ENSMUST00000194368 194 ntBASIC31.24■■■□□ 2.59
Rsph6aQ8CDR2 Gm6311-201ENSMUST00000073790 878 ntBASIC31.24■■■□□ 2.59
Rsph6aQ8CDR2 Amer2-203ENSMUST00000225247 2662 ntBASIC31.23■■■□□ 2.59
Rsph6aQ8CDR2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31.23■■■□□ 2.59
Rsph6aQ8CDR2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.23■■■□□ 2.59
Rsph6aQ8CDR2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Rsph6aQ8CDR2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Rsph6aQ8CDR2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
Rsph6aQ8CDR2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Rsph6aQ8CDR2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Rsph6aQ8CDR2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Rsph6aQ8CDR2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rsph6aQ8CDR2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC31.16■■■□□ 2.58
Rsph6aQ8CDR2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31.16■■■□□ 2.58
Rsph6aQ8CDR2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Rsph6aQ8CDR2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31.15■■■□□ 2.58
Rsph6aQ8CDR2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rsph6aQ8CDR2 Mir6538-201ENSMUST00000183713 110 ntBASIC31.14■■■□□ 2.58
Rsph6aQ8CDR2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rsph6aQ8CDR2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Rsph6aQ8CDR2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rsph6aQ8CDR2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.14■■■□□ 2.58
Rsph6aQ8CDR2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rsph6aQ8CDR2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31.13■■■□□ 2.57
Rsph6aQ8CDR2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rsph6aQ8CDR2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Rsph6aQ8CDR2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rsph6aQ8CDR2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Rsph6aQ8CDR2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rsph6aQ8CDR2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rsph6aQ8CDR2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rsph6aQ8CDR2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Rsph6aQ8CDR2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rsph6aQ8CDR2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rsph6aQ8CDR2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rsph6aQ8CDR2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
Rsph6aQ8CDR2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Rsph6aQ8CDR2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Rsph6aQ8CDR2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.06■■■□□ 2.56
Rsph6aQ8CDR2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Rsph6aQ8CDR2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rsph6aQ8CDR2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rsph6aQ8CDR2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Rsph6aQ8CDR2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC31.04■■■□□ 2.56
Rsph6aQ8CDR2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rsph6aQ8CDR2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rsph6aQ8CDR2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Rsph6aQ8CDR2 Gm4799-201ENSMUST00000095396 657 ntBASIC31.02■■■□□ 2.56
Rsph6aQ8CDR2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Rsph6aQ8CDR2 AC154454.1-201ENSMUST00000225253 216 ntBASIC31.01■■■□□ 2.55
Rsph6aQ8CDR2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rsph6aQ8CDR2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31■■■□□ 2.55
Rsph6aQ8CDR2 Gm45364-201ENSMUST00000210883 159 ntBASIC31■■■□□ 2.55
Rsph6aQ8CDR2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Rsph6aQ8CDR2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Rsph6aQ8CDR2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Rsph6aQ8CDR2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Rsph6aQ8CDR2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30.98■■■□□ 2.55
Rsph6aQ8CDR2 Mir3960-201ENSMUST00000198213 73 ntBASIC30.97■■■□□ 2.55
Rsph6aQ8CDR2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Rsph6aQ8CDR2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
Rsph6aQ8CDR2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Rsph6aQ8CDR2 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.92■■■□□ 2.54
Rsph6aQ8CDR2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Rsph6aQ8CDR2 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.92■■■□□ 2.54
Rsph6aQ8CDR2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Rsph6aQ8CDR2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Rsph6aQ8CDR2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.91■■■□□ 2.54
Rsph6aQ8CDR2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Rsph6aQ8CDR2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.91■■■□□ 2.54
Rsph6aQ8CDR2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rsph6aQ8CDR2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Rsph6aQ8CDR2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Rsph6aQ8CDR2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms