Protein–RNA interactions for Protein: Q8BW22

Ss18l1, Calcium-responsive transactivator, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18l1Q8BW22 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ss18l1Q8BW22 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ss18l1Q8BW22 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ss18l1Q8BW22 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.34■■□□□ 1.01
Ss18l1Q8BW22 Gm12366-201ENSMUST00000121722 873 ntBASIC21.34■■□□□ 1.01
Ss18l1Q8BW22 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.34■■□□□ 1.01
Ss18l1Q8BW22 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ss18l1Q8BW22 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.34■■□□□ 1.01
Ss18l1Q8BW22 Gm5786-201ENSMUST00000085368 882 ntBASIC21.34■■□□□ 1.01
Ss18l1Q8BW22 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ss18l1Q8BW22 Gm11687-201ENSMUST00000118911 886 ntBASIC21.33■■□□□ 1.01
Ss18l1Q8BW22 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ss18l1Q8BW22 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ss18l1Q8BW22 Gm16437-201ENSMUST00000025669 507 ntBASIC21.32■■□□□ 1
Ss18l1Q8BW22 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ss18l1Q8BW22 Gm4799-201ENSMUST00000095396 657 ntBASIC21.32■■□□□ 1
Ss18l1Q8BW22 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ss18l1Q8BW22 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ss18l1Q8BW22 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ss18l1Q8BW22 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ss18l1Q8BW22 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.3■■□□□ 1
Ss18l1Q8BW22 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.3■■□□□ 1
Ss18l1Q8BW22 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.3■■□□□ 1
Ss18l1Q8BW22 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ss18l1Q8BW22 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ss18l1Q8BW22 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ss18l1Q8BW22 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.29■■□□□ 1
Ss18l1Q8BW22 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.29■■□□□ 1
Ss18l1Q8BW22 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ss18l1Q8BW22 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ss18l1Q8BW22 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ss18l1Q8BW22 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ss18l1Q8BW22 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ss18l1Q8BW22 Mir3960-201ENSMUST00000198213 73 ntBASIC21.27■■□□□ 1
Ss18l1Q8BW22 Gm45364-201ENSMUST00000210883 159 ntBASIC21.27■■□□□ 1
Ss18l1Q8BW22 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.26■□□□□ 0.99
Ss18l1Q8BW22 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.26■□□□□ 0.99
Ss18l1Q8BW22 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.25■□□□□ 0.99
Ss18l1Q8BW22 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ss18l1Q8BW22 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ss18l1Q8BW22 Gm37136-201ENSMUST00000194368 194 ntBASIC21.24■□□□□ 0.99
Ss18l1Q8BW22 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ss18l1Q8BW22 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ss18l1Q8BW22 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ss18l1Q8BW22 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ss18l1Q8BW22 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.22■□□□□ 0.99
Ss18l1Q8BW22 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.22■□□□□ 0.99
Ss18l1Q8BW22 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ss18l1Q8BW22 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ss18l1Q8BW22 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ss18l1Q8BW22 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ss18l1Q8BW22 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ss18l1Q8BW22 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ss18l1Q8BW22 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.21■□□□□ 0.99
Ss18l1Q8BW22 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ss18l1Q8BW22 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ss18l1Q8BW22 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ss18l1Q8BW22 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ss18l1Q8BW22 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ss18l1Q8BW22 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ss18l1Q8BW22 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.19■□□□□ 0.98
Ss18l1Q8BW22 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ss18l1Q8BW22 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.19■□□□□ 0.98
Ss18l1Q8BW22 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ss18l1Q8BW22 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ss18l1Q8BW22 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ss18l1Q8BW22 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Ss18l1Q8BW22 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ss18l1Q8BW22 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ss18l1Q8BW22 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.16■□□□□ 0.98
Ss18l1Q8BW22 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ss18l1Q8BW22 Gm27502-201ENSMUST00000183495 199 ntBASIC21.16■□□□□ 0.98
Ss18l1Q8BW22 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.15■□□□□ 0.98
Ss18l1Q8BW22 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ss18l1Q8BW22 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ss18l1Q8BW22 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ss18l1Q8BW22 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.13■□□□□ 0.97
Ss18l1Q8BW22 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ss18l1Q8BW22 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ss18l1Q8BW22 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ss18l1Q8BW22 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ss18l1Q8BW22 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.12■□□□□ 0.97
Ss18l1Q8BW22 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ss18l1Q8BW22 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ss18l1Q8BW22 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.12■□□□□ 0.97
Ss18l1Q8BW22 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ss18l1Q8BW22 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.12■□□□□ 0.97
Ss18l1Q8BW22 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ss18l1Q8BW22 Gm7332-201ENSMUST00000118351 454 ntBASIC21.11■□□□□ 0.97
Ss18l1Q8BW22 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ss18l1Q8BW22 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ss18l1Q8BW22 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ss18l1Q8BW22 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ss18l1Q8BW22 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.09■□□□□ 0.97
Ss18l1Q8BW22 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ss18l1Q8BW22 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.09■□□□□ 0.97
Ss18l1Q8BW22 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.08■□□□□ 0.97
Ss18l1Q8BW22 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.08■□□□□ 0.97
Ss18l1Q8BW22 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ss18l1Q8BW22 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms