Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Usp6nlQ80XC3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Usp6nlQ80XC3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.48■■□□□ 1.83
Usp6nlQ80XC3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.48■■□□□ 1.83
Usp6nlQ80XC3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Usp6nlQ80XC3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Usp6nlQ80XC3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Usp6nlQ80XC3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Usp6nlQ80XC3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Usp6nlQ80XC3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp6nlQ80XC3 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.43■■□□□ 1.82
Usp6nlQ80XC3 Gm9806-201ENSMUST00000051080 552 ntBASIC26.43■■□□□ 1.82
Usp6nlQ80XC3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Usp6nlQ80XC3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp6nlQ80XC3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.42■■□□□ 1.82
Usp6nlQ80XC3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp6nlQ80XC3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Usp6nlQ80XC3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Usp6nlQ80XC3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Usp6nlQ80XC3 Gm4799-201ENSMUST00000095396 657 ntBASIC26.41■■□□□ 1.82
Usp6nlQ80XC3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Usp6nlQ80XC3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.4■■□□□ 1.82
Usp6nlQ80XC3 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.4■■□□□ 1.82
Usp6nlQ80XC3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Usp6nlQ80XC3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Usp6nlQ80XC3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Usp6nlQ80XC3 Gm11687-201ENSMUST00000118911 886 ntBASIC26.39■■□□□ 1.82
Usp6nlQ80XC3 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.39■■□□□ 1.81
Usp6nlQ80XC3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.38■■□□□ 1.81
Usp6nlQ80XC3 Gm37136-201ENSMUST00000194368 194 ntBASIC26.38■■□□□ 1.81
Usp6nlQ80XC3 Mir3960-201ENSMUST00000198213 73 ntBASIC26.38■■□□□ 1.81
Usp6nlQ80XC3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.38■■□□□ 1.81
Usp6nlQ80XC3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Gm12366-201ENSMUST00000121722 873 ntBASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Gm5786-201ENSMUST00000085368 882 ntBASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Usp6nlQ80XC3 Gm45364-201ENSMUST00000210883 159 ntBASIC26.36■■□□□ 1.81
Usp6nlQ80XC3 Gm16437-201ENSMUST00000025669 507 ntBASIC26.36■■□□□ 1.81
Usp6nlQ80XC3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.36■■□□□ 1.81
Usp6nlQ80XC3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Usp6nlQ80XC3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Usp6nlQ80XC3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.34■■□□□ 1.81
Usp6nlQ80XC3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Usp6nlQ80XC3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.34■■□□□ 1.81
Usp6nlQ80XC3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.33■■□□□ 1.81
Usp6nlQ80XC3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Usp6nlQ80XC3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Usp6nlQ80XC3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Usp6nlQ80XC3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.31■■□□□ 1.8
Usp6nlQ80XC3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Usp6nlQ80XC3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.29■■□□□ 1.8
Usp6nlQ80XC3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Usp6nlQ80XC3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp6nlQ80XC3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp6nlQ80XC3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Usp6nlQ80XC3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Usp6nlQ80XC3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Usp6nlQ80XC3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Usp6nlQ80XC3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
Usp6nlQ80XC3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp6nlQ80XC3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Usp6nlQ80XC3 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.25■■□□□ 1.79
Usp6nlQ80XC3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Usp6nlQ80XC3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp6nlQ80XC3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Usp6nlQ80XC3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Usp6nlQ80XC3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.24■■□□□ 1.79
Usp6nlQ80XC3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Usp6nlQ80XC3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp6nlQ80XC3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Usp6nlQ80XC3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp6nlQ80XC3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp6nlQ80XC3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Usp6nlQ80XC3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Usp6nlQ80XC3 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.2■■□□□ 1.79
Usp6nlQ80XC3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Usp6nlQ80XC3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Usp6nlQ80XC3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Usp6nlQ80XC3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Usp6nlQ80XC3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Usp6nlQ80XC3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.18■■□□□ 1.78
Usp6nlQ80XC3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp6nlQ80XC3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp6nlQ80XC3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp6nlQ80XC3 Zxda-201ENSMUST00000117281 2621 ntBASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.15■■□□□ 1.78
Usp6nlQ80XC3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Usp6nlQ80XC3 Gm27502-201ENSMUST00000183495 199 ntBASIC26.14■■□□□ 1.78
Usp6nlQ80XC3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Usp6nlQ80XC3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms