Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC43.16■■■■■ 4.5
Rtl1Q7M732 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC43.15■■■■■ 4.5
Rtl1Q7M732 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC43.15■■■■■ 4.5
Rtl1Q7M732 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC43.15■■■■■ 4.5
Rtl1Q7M732 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC43.15■■■■■ 4.5
Rtl1Q7M732 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC43.14■■■■■ 4.5
Rtl1Q7M732 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC43.13■■■■■ 4.49
Rtl1Q7M732 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC43.13■■■■■ 4.49
Rtl1Q7M732 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC43.13■■■■■ 4.49
Rtl1Q7M732 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC43.12■■■■■ 4.49
Rtl1Q7M732 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC43.12■■■■■ 4.49
Rtl1Q7M732 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC43.11■■■■■ 4.49
Rtl1Q7M732 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC43.11■■■■■ 4.49
Rtl1Q7M732 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC43.11■■■■■ 4.49
Rtl1Q7M732 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC43.1■■■■■ 4.49
Rtl1Q7M732 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC43.1■■■■■ 4.49
Rtl1Q7M732 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC43.1■■■■■ 4.49
Rtl1Q7M732 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC43.09■■■■■ 4.49
Rtl1Q7M732 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC43.07■■■■■ 4.49
Rtl1Q7M732 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC43.05■■■■■ 4.48
Rtl1Q7M732 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC43.05■■■■■ 4.48
Rtl1Q7M732 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC43.05■■■■■ 4.48
Rtl1Q7M732 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC43.04■■■■■ 4.48
Rtl1Q7M732 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC43.03■■■■■ 4.48
Rtl1Q7M732 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC43.03■■■■■ 4.48
Rtl1Q7M732 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC43.02■■■■■ 4.48
Rtl1Q7M732 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC43.02■■■■■ 4.48
Rtl1Q7M732 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC43.01■■■■■ 4.47
Rtl1Q7M732 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC43■■■■■ 4.47
Rtl1Q7M732 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC42.99■■■■■ 4.47
Rtl1Q7M732 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC42.98■■■■■ 4.47
Rtl1Q7M732 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC42.97■■■■■ 4.47
Rtl1Q7M732 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC42.96■■■■■ 4.47
Rtl1Q7M732 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC42.95■■■■■ 4.47
Rtl1Q7M732 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC42.95■■■■■ 4.47
Rtl1Q7M732 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC42.94■■■■■ 4.47
Rtl1Q7M732 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC42.94■■■■■ 4.46
Rtl1Q7M732 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC42.94■■■■■ 4.46
Rtl1Q7M732 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC42.91■■■■■ 4.46
Rtl1Q7M732 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC42.91■■■■■ 4.46
Rtl1Q7M732 AC167019.3-201ENSMUST00000228225 1266 ntBASIC42.88■■■■■ 4.46
Rtl1Q7M732 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC42.88■■■■■ 4.46
Rtl1Q7M732 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC42.86■■■■■ 4.45
Rtl1Q7M732 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC42.86■■■■■ 4.45
Rtl1Q7M732 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC42.85■■■■■ 4.45
Rtl1Q7M732 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC42.85■■■■■ 4.45
Rtl1Q7M732 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC42.84■■■■■ 4.45
Rtl1Q7M732 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC42.84■■■■■ 4.45
Rtl1Q7M732 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC42.84■■■■■ 4.45
Rtl1Q7M732 Gm11175-201ENSMUST00000116172 543 ntBASIC42.84■■■■■ 4.45
Rtl1Q7M732 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC42.84■■■■■ 4.45
Rtl1Q7M732 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC42.83■■■■■ 4.45
Rtl1Q7M732 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC42.82■■■■■ 4.45
Rtl1Q7M732 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC42.82■■■■■ 4.44
Rtl1Q7M732 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC42.81■■■■■ 4.44
Rtl1Q7M732 Mir6538-201ENSMUST00000183713 110 ntBASIC42.79■■■■■ 4.44
Rtl1Q7M732 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC42.76■■■■■ 4.44
Rtl1Q7M732 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC42.76■■■■■ 4.44
Rtl1Q7M732 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC42.72■■■■■ 4.43
Rtl1Q7M732 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC42.71■■■■■ 4.43
Rtl1Q7M732 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC42.7■■■■■ 4.43
Rtl1Q7M732 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC42.69■■■■■ 4.42
Rtl1Q7M732 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC42.69■■■■■ 4.42
Rtl1Q7M732 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC42.68■■■■■ 4.42
Rtl1Q7M732 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC42.67■■■■■ 4.42
Rtl1Q7M732 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC42.67■■■■■ 4.42
Rtl1Q7M732 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC42.66■■■■■ 4.42
Rtl1Q7M732 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC42.66■■■■■ 4.42
Rtl1Q7M732 Gm37136-201ENSMUST00000194368 194 ntBASIC42.66■■■■■ 4.42
Rtl1Q7M732 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC42.66■■■■■ 4.42
Rtl1Q7M732 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC42.66■■■■■ 4.42
Rtl1Q7M732 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC42.65■■■■■ 4.42
Rtl1Q7M732 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC42.65■■■■■ 4.42
Rtl1Q7M732 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC42.64■■■■■ 4.42
Rtl1Q7M732 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC42.64■■■■■ 4.42
Rtl1Q7M732 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC42.63■■■■■ 4.41
Rtl1Q7M732 Gm45364-201ENSMUST00000210883 159 ntBASIC42.63■■■■■ 4.41
Rtl1Q7M732 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC42.61■■■■■ 4.41
Rtl1Q7M732 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC42.61■■■■■ 4.41
Rtl1Q7M732 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC42.61■■■■■ 4.41
Rtl1Q7M732 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC42.6■■■■■ 4.41
Rtl1Q7M732 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC42.6■■■■■ 4.41
Rtl1Q7M732 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC42.58■■■■■ 4.41
Rtl1Q7M732 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC42.57■■■■■ 4.41
Rtl1Q7M732 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC42.57■■■■■ 4.4
Rtl1Q7M732 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC42.56■■■■■ 4.4
Rtl1Q7M732 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC42.56■■■■■ 4.4
Rtl1Q7M732 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC42.56■■■■■ 4.4
Rtl1Q7M732 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC42.56■■■■■ 4.4
Rtl1Q7M732 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC42.55■■■■■ 4.4
Rtl1Q7M732 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC42.55■■■■■ 4.4
Rtl1Q7M732 Gm6311-201ENSMUST00000073790 878 ntBASIC42.55■■■■■ 4.4
Rtl1Q7M732 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC42.54■■■■■ 4.4
Rtl1Q7M732 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC42.54■■■■■ 4.4
Rtl1Q7M732 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC42.54■■■■■ 4.4
Rtl1Q7M732 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC42.54■■■■■ 4.4
Rtl1Q7M732 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC42.53■■■■■ 4.4
Rtl1Q7M732 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC42.51■■■■■ 4.4
Rtl1Q7M732 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC42.49■■■■■ 4.39
Rtl1Q7M732 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC42.49■■■■■ 4.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms