Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.03■■□□□ 1.44
Sox11Q7M6Y2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sox11Q7M6Y2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sox11Q7M6Y2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sox11Q7M6Y2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Sox11Q7M6Y2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Sox11Q7M6Y2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Sox11Q7M6Y2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24■■□□□ 1.43
Sox11Q7M6Y2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24■■□□□ 1.43
Sox11Q7M6Y2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24■■□□□ 1.43
Sox11Q7M6Y2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sox11Q7M6Y2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Sox11Q7M6Y2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Sox11Q7M6Y2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Sox11Q7M6Y2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sox11Q7M6Y2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sox11Q7M6Y2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Sox11Q7M6Y2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Sox11Q7M6Y2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Sox11Q7M6Y2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.96■■□□□ 1.43
Sox11Q7M6Y2 Gm12366-201ENSMUST00000121722 873 ntBASIC23.96■■□□□ 1.43
Sox11Q7M6Y2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.96■■□□□ 1.43
Sox11Q7M6Y2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Sox11Q7M6Y2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.96■■□□□ 1.43
Sox11Q7M6Y2 Gm5786-201ENSMUST00000085368 882 ntBASIC23.96■■□□□ 1.43
Sox11Q7M6Y2 Scarna2-201ENSMUST00000157560 414 ntBASIC23.95■■□□□ 1.42
Sox11Q7M6Y2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Sox11Q7M6Y2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Sox11Q7M6Y2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Sox11Q7M6Y2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Sox11Q7M6Y2 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.95■■□□□ 1.42
Sox11Q7M6Y2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Sox11Q7M6Y2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sox11Q7M6Y2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sox11Q7M6Y2 Gm11687-201ENSMUST00000118911 886 ntBASIC23.93■■□□□ 1.42
Sox11Q7M6Y2 Gm9806-201ENSMUST00000051080 552 ntBASIC23.93■■□□□ 1.42
Sox11Q7M6Y2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Sox11Q7M6Y2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Sox11Q7M6Y2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sox11Q7M6Y2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.92■■□□□ 1.42
Sox11Q7M6Y2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Sox11Q7M6Y2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sox11Q7M6Y2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sox11Q7M6Y2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sox11Q7M6Y2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.9■■□□□ 1.42
Sox11Q7M6Y2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Sox11Q7M6Y2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sox11Q7M6Y2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sox11Q7M6Y2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sox11Q7M6Y2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.88■■□□□ 1.41
Sox11Q7M6Y2 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.88■■□□□ 1.41
Sox11Q7M6Y2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sox11Q7M6Y2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Sox11Q7M6Y2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sox11Q7M6Y2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sox11Q7M6Y2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Sox11Q7M6Y2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.86■■□□□ 1.41
Sox11Q7M6Y2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sox11Q7M6Y2 Amer2-203ENSMUST00000225247 2662 ntBASIC23.86■■□□□ 1.41
Sox11Q7M6Y2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sox11Q7M6Y2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Sox11Q7M6Y2 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.84■■□□□ 1.41
Sox11Q7M6Y2 Gm4799-201ENSMUST00000095396 657 ntBASIC23.84■■□□□ 1.41
Sox11Q7M6Y2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
Sox11Q7M6Y2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sox11Q7M6Y2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
Sox11Q7M6Y2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sox11Q7M6Y2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sox11Q7M6Y2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sox11Q7M6Y2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sox11Q7M6Y2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sox11Q7M6Y2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox11Q7M6Y2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.8■■□□□ 1.4
Sox11Q7M6Y2 Gm16437-201ENSMUST00000025669 507 ntBASIC23.8■■□□□ 1.4
Sox11Q7M6Y2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox11Q7M6Y2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox11Q7M6Y2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.79■■□□□ 1.4
Sox11Q7M6Y2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox11Q7M6Y2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox11Q7M6Y2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Sox11Q7M6Y2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sox11Q7M6Y2 Mir3960-201ENSMUST00000198213 73 ntBASIC23.77■■□□□ 1.4
Sox11Q7M6Y2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Sox11Q7M6Y2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Sox11Q7M6Y2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Sox11Q7M6Y2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.76■■□□□ 1.39
Sox11Q7M6Y2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.76■■□□□ 1.39
Sox11Q7M6Y2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sox11Q7M6Y2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox11Q7M6Y2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox11Q7M6Y2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Sox11Q7M6Y2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox11Q7M6Y2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.74■■□□□ 1.39
Sox11Q7M6Y2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Sox11Q7M6Y2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Sox11Q7M6Y2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.73■■□□□ 1.39
Sox11Q7M6Y2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sox11Q7M6Y2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sox11Q7M6Y2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sox11Q7M6Y2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms