Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zfp248Q640N4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zfp248Q640N4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zfp248Q640N4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zfp248Q640N4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Zfp248Q640N4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zfp248Q640N4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zfp248Q640N4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Zfp248Q640N4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Zfp248Q640N4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zfp248Q640N4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zfp248Q640N4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp248Q640N4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp248Q640N4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp248Q640N4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp248Q640N4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp248Q640N4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Zfp248Q640N4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp248Q640N4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp248Q640N4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp248Q640N4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.78■□□□□ 0.44
Zfp248Q640N4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zfp248Q640N4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zfp248Q640N4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Zfp248Q640N4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Zfp248Q640N4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.77■□□□□ 0.44
Zfp248Q640N4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zfp248Q640N4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Zfp248Q640N4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zfp248Q640N4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zfp248Q640N4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zfp248Q640N4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Zfp248Q640N4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.75■□□□□ 0.43
Zfp248Q640N4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.75■□□□□ 0.43
Zfp248Q640N4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Zfp248Q640N4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zfp248Q640N4 Gm30023-201ENSMUST00000197970 889 ntBASIC17.74■□□□□ 0.43
Zfp248Q640N4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zfp248Q640N4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Zfp248Q640N4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zfp248Q640N4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zfp248Q640N4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zfp248Q640N4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zfp248Q640N4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zfp248Q640N4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Zfp248Q640N4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zfp248Q640N4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zfp248Q640N4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zfp248Q640N4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Zfp248Q640N4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zfp248Q640N4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Zfp248Q640N4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zfp248Q640N4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.71■□□□□ 0.43
Zfp248Q640N4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Zfp248Q640N4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Zfp248Q640N4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Zfp248Q640N4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zfp248Q640N4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Zfp248Q640N4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Zfp248Q640N4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Zfp248Q640N4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Zfp248Q640N4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zfp248Q640N4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zfp248Q640N4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Zfp248Q640N4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.67■□□□□ 0.42
Zfp248Q640N4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Zfp248Q640N4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zfp248Q640N4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zfp248Q640N4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zfp248Q640N4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zfp248Q640N4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zfp248Q640N4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Zfp248Q640N4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.66■□□□□ 0.42
Zfp248Q640N4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zfp248Q640N4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Zfp248Q640N4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Zfp248Q640N4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Zfp248Q640N4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Zfp248Q640N4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Zfp248Q640N4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zfp248Q640N4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.65■□□□□ 0.42
Zfp248Q640N4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zfp248Q640N4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.64■□□□□ 0.41
Zfp248Q640N4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zfp248Q640N4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zfp248Q640N4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Zfp248Q640N4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Zfp248Q640N4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zfp248Q640N4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zfp248Q640N4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zfp248Q640N4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zfp248Q640N4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Zfp248Q640N4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zfp248Q640N4 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.62■□□□□ 0.41
Zfp248Q640N4 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.62■□□□□ 0.41
Zfp248Q640N4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zfp248Q640N4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zfp248Q640N4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Zfp248Q640N4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zfp248Q640N4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms