Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ss18Q62280 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.25■□□□□ 0.35
Ss18Q62280 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ss18Q62280 Zfp131-205ENSMUST00000223812 663 ntBASIC17.25■□□□□ 0.35
Ss18Q62280 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ss18Q62280 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ss18Q62280 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ss18Q62280 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ss18Q62280 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ss18Q62280 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ss18Q62280 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ss18Q62280 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ss18Q62280 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ss18Q62280 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ss18Q62280 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ss18Q62280 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ss18Q62280 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.22■□□□□ 0.35
Ss18Q62280 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.22■□□□□ 0.35
Ss18Q62280 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ss18Q62280 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ss18Q62280 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ss18Q62280 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ss18Q62280 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.21■□□□□ 0.35
Ss18Q62280 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ss18Q62280 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ss18Q62280 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ss18Q62280 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ss18Q62280 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ss18Q62280 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ss18Q62280 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.19■□□□□ 0.34
Ss18Q62280 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ss18Q62280 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.18■□□□□ 0.34
Ss18Q62280 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Ss18Q62280 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ss18Q62280 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ss18Q62280 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.18■□□□□ 0.34
Ss18Q62280 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ss18Q62280 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ss18Q62280 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ss18Q62280 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ss18Q62280 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ss18Q62280 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ss18Q62280 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.16■□□□□ 0.34
Ss18Q62280 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ss18Q62280 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ss18Q62280 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.15■□□□□ 0.34
Ss18Q62280 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ss18Q62280 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ss18Q62280 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ss18Q62280 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.14■□□□□ 0.33
Ss18Q62280 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ss18Q62280 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Ss18Q62280 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ss18Q62280 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ss18Q62280 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.13■□□□□ 0.33
Ss18Q62280 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ss18Q62280 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ss18Q62280 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ss18Q62280 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.12■□□□□ 0.33
Ss18Q62280 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ss18Q62280 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ss18Q62280 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.12■□□□□ 0.33
Ss18Q62280 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ss18Q62280 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ss18Q62280 Gm9397-201ENSMUST00000200125 605 ntBASIC17.11■□□□□ 0.33
Ss18Q62280 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.11■□□□□ 0.33
Ss18Q62280 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ss18Q62280 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ss18Q62280 Gm24970-201ENSMUST00000175582 82 ntBASIC17.1■□□□□ 0.33
Ss18Q62280 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.1■□□□□ 0.33
Ss18Q62280 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ss18Q62280 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.1■□□□□ 0.33
Ss18Q62280 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ss18Q62280 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ss18Q62280 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ss18Q62280 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ss18Q62280 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ss18Q62280 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ss18Q62280 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.07■□□□□ 0.32
Ss18Q62280 Gm45855-201ENSMUST00000212546 880 ntBASIC17.07■□□□□ 0.32
Ss18Q62280 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ss18Q62280 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ss18Q62280 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ss18Q62280 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ss18Q62280 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ss18Q62280 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ss18Q62280 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ss18Q62280 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ss18Q62280 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.04■□□□□ 0.32
Ss18Q62280 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ss18Q62280 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ss18Q62280 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ss18Q62280 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ss18Q62280 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ss18Q62280 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.03■□□□□ 0.32
Ss18Q62280 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ss18Q62280 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ss18Q62280 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ss18Q62280 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ss18Q62280 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms