Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sdf4Q61112 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.88■■□□□ 1.41
Sdf4Q61112 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sdf4Q61112 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Sdf4Q61112 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sdf4Q61112 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sdf4Q61112 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
Sdf4Q61112 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Sdf4Q61112 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.87■■□□□ 1.41
Sdf4Q61112 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sdf4Q61112 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.86■■□□□ 1.41
Sdf4Q61112 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sdf4Q61112 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sdf4Q61112 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Sdf4Q61112 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.85■■□□□ 1.41
Sdf4Q61112 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Sdf4Q61112 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.84■■□□□ 1.41
Sdf4Q61112 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Sdf4Q61112 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.82■■□□□ 1.4
Sdf4Q61112 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Sdf4Q61112 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sdf4Q61112 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sdf4Q61112 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sdf4Q61112 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sdf4Q61112 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sdf4Q61112 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sdf4Q61112 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Sdf4Q61112 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.8■■□□□ 1.4
Sdf4Q61112 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sdf4Q61112 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sdf4Q61112 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sdf4Q61112 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sdf4Q61112 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.79■■□□□ 1.4
Sdf4Q61112 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.78■■□□□ 1.4
Sdf4Q61112 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Sdf4Q61112 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sdf4Q61112 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Sdf4Q61112 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sdf4Q61112 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.76■■□□□ 1.39
Sdf4Q61112 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sdf4Q61112 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.75■■□□□ 1.39
Sdf4Q61112 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sdf4Q61112 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sdf4Q61112 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sdf4Q61112 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Sdf4Q61112 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sdf4Q61112 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Sdf4Q61112 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sdf4Q61112 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sdf4Q61112 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sdf4Q61112 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.72■■□□□ 1.39
Sdf4Q61112 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Sdf4Q61112 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.71■■□□□ 1.39
Sdf4Q61112 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Sdf4Q61112 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sdf4Q61112 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Sdf4Q61112 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sdf4Q61112 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sdf4Q61112 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Sdf4Q61112 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Sdf4Q61112 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sdf4Q61112 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Sdf4Q61112 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.68■■□□□ 1.38
Sdf4Q61112 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.68■■□□□ 1.38
Sdf4Q61112 Particl-201ENSMUST00000205370 1560 ntBASIC23.67■■□□□ 1.38
Sdf4Q61112 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sdf4Q61112 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sdf4Q61112 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sdf4Q61112 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sdf4Q61112 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sdf4Q61112 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sdf4Q61112 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sdf4Q61112 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sdf4Q61112 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Sdf4Q61112 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sdf4Q61112 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Sdf4Q61112 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Sdf4Q61112 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sdf4Q61112 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sdf4Q61112 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Sdf4Q61112 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Sdf4Q61112 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Sdf4Q61112 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sdf4Q61112 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sdf4Q61112 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sdf4Q61112 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Sdf4Q61112 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sdf4Q61112 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sdf4Q61112 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Sdf4Q61112 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Sdf4Q61112 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Sdf4Q61112 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.57■■□□□ 1.36
Sdf4Q61112 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sdf4Q61112 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Sdf4Q61112 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.56■■□□□ 1.36
Sdf4Q61112 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Sdf4Q61112 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sdf4Q61112 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Sdf4Q61112 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sdf4Q61112 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms