Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav8d-1Q5R1H8 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.03■□□□□ 0.64
Trav8d-1Q5R1H8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav8d-1Q5R1H8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8d-1Q5R1H8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8d-1Q5R1H8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8d-1Q5R1H8 Gm45855-201ENSMUST00000212546 880 ntBASIC19.02■□□□□ 0.64
Trav8d-1Q5R1H8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav8d-1Q5R1H8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav8d-1Q5R1H8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.02■□□□□ 0.63
Trav8d-1Q5R1H8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav8d-1Q5R1H8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Trav8d-1Q5R1H8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8d-1Q5R1H8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8d-1Q5R1H8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav8d-1Q5R1H8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-1Q5R1H8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-1Q5R1H8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-1Q5R1H8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-1Q5R1H8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav8d-1Q5R1H8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19■□□□□ 0.63
Trav8d-1Q5R1H8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav8d-1Q5R1H8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-1Q5R1H8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-1Q5R1H8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav8d-1Q5R1H8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav8d-1Q5R1H8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav8d-1Q5R1H8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8d-1Q5R1H8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8d-1Q5R1H8 Gm9397-201ENSMUST00000200125 605 ntBASIC18.98■□□□□ 0.63
Trav8d-1Q5R1H8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8d-1Q5R1H8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav8d-1Q5R1H8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-1Q5R1H8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-1Q5R1H8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-1Q5R1H8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-1Q5R1H8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav8d-1Q5R1H8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trav8d-1Q5R1H8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trav8d-1Q5R1H8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-1Q5R1H8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav8d-1Q5R1H8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Trav8d-1Q5R1H8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trav8d-1Q5R1H8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-1Q5R1H8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-1Q5R1H8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-1Q5R1H8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-1Q5R1H8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav8d-1Q5R1H8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Trav8d-1Q5R1H8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8d-1Q5R1H8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8d-1Q5R1H8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav8d-1Q5R1H8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav8d-1Q5R1H8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav8d-1Q5R1H8 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.93■□□□□ 0.62
Trav8d-1Q5R1H8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav8d-1Q5R1H8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav8d-1Q5R1H8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.92■□□□□ 0.62
Trav8d-1Q5R1H8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trav8d-1Q5R1H8 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.92■□□□□ 0.62
Trav8d-1Q5R1H8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8d-1Q5R1H8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8d-1Q5R1H8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8d-1Q5R1H8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8d-1Q5R1H8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8d-1Q5R1H8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8d-1Q5R1H8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8d-1Q5R1H8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8d-1Q5R1H8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8d-1Q5R1H8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8d-1Q5R1H8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8d-1Q5R1H8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Trav8d-1Q5R1H8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trav8d-1Q5R1H8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav8d-1Q5R1H8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8d-1Q5R1H8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trav8d-1Q5R1H8 Gm24970-201ENSMUST00000175582 82 ntBASIC18.88■□□□□ 0.61
Trav8d-1Q5R1H8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.88■□□□□ 0.61
Trav8d-1Q5R1H8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8d-1Q5R1H8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8d-1Q5R1H8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8d-1Q5R1H8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8d-1Q5R1H8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav8d-1Q5R1H8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav8d-1Q5R1H8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav8d-1Q5R1H8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav8d-1Q5R1H8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav8d-1Q5R1H8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav8d-1Q5R1H8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav8d-1Q5R1H8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8d-1Q5R1H8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav8d-1Q5R1H8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8d-1Q5R1H8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8d-1Q5R1H8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.85■□□□□ 0.61
Trav8d-1Q5R1H8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trav8d-1Q5R1H8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav8d-1Q5R1H8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trav8d-1Q5R1H8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav8d-1Q5R1H8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8d-1Q5R1H8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms