Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lin28bQ45KJ6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.55■■□□□ 1.2
Lin28bQ45KJ6 Mir6538-201ENSMUST00000183713 110 ntBASIC22.55■■□□□ 1.2
Lin28bQ45KJ6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lin28bQ45KJ6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.53■■□□□ 1.2
Lin28bQ45KJ6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Lin28bQ45KJ6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lin28bQ45KJ6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lin28bQ45KJ6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lin28bQ45KJ6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Lin28bQ45KJ6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lin28bQ45KJ6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
Lin28bQ45KJ6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lin28bQ45KJ6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lin28bQ45KJ6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Lin28bQ45KJ6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lin28bQ45KJ6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.49■■□□□ 1.19
Lin28bQ45KJ6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lin28bQ45KJ6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lin28bQ45KJ6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lin28bQ45KJ6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.48■■□□□ 1.19
Lin28bQ45KJ6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lin28bQ45KJ6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lin28bQ45KJ6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.46■■□□□ 1.19
Lin28bQ45KJ6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
Lin28bQ45KJ6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lin28bQ45KJ6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Lin28bQ45KJ6 Cap2-205ENSMUST00000225824 1634 ntBASIC22.45■■□□□ 1.18
Lin28bQ45KJ6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Lin28bQ45KJ6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lin28bQ45KJ6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Lin28bQ45KJ6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lin28bQ45KJ6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lin28bQ45KJ6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lin28bQ45KJ6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Lin28bQ45KJ6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lin28bQ45KJ6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Lin28bQ45KJ6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lin28bQ45KJ6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Lin28bQ45KJ6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Amer2-203ENSMUST00000225247 2662 ntBASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lin28bQ45KJ6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lin28bQ45KJ6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Lin28bQ45KJ6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
Lin28bQ45KJ6 Gm4799-201ENSMUST00000095396 657 ntBASIC22.38■■□□□ 1.17
Lin28bQ45KJ6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lin28bQ45KJ6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.37■■□□□ 1.17
Lin28bQ45KJ6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lin28bQ45KJ6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Lin28bQ45KJ6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lin28bQ45KJ6 Scarna2-201ENSMUST00000157560 414 ntBASIC22.36■■□□□ 1.17
Lin28bQ45KJ6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.36■■□□□ 1.17
Lin28bQ45KJ6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.36■■□□□ 1.17
Lin28bQ45KJ6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lin28bQ45KJ6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Lin28bQ45KJ6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lin28bQ45KJ6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lin28bQ45KJ6 Gm37136-201ENSMUST00000194368 194 ntBASIC22.33■■□□□ 1.17
Lin28bQ45KJ6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lin28bQ45KJ6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Lin28bQ45KJ6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lin28bQ45KJ6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
Lin28bQ45KJ6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lin28bQ45KJ6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lin28bQ45KJ6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.31■■□□□ 1.16
Lin28bQ45KJ6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lin28bQ45KJ6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Lin28bQ45KJ6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.3■■□□□ 1.16
Lin28bQ45KJ6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lin28bQ45KJ6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Lin28bQ45KJ6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lin28bQ45KJ6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.29■■□□□ 1.16
Lin28bQ45KJ6 Mir3960-201ENSMUST00000198213 73 ntBASIC22.29■■□□□ 1.16
Lin28bQ45KJ6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.29■■□□□ 1.16
Lin28bQ45KJ6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lin28bQ45KJ6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lin28bQ45KJ6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lin28bQ45KJ6 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.28■■□□□ 1.16
Lin28bQ45KJ6 Gm16437-201ENSMUST00000025669 507 ntBASIC22.28■■□□□ 1.16
Lin28bQ45KJ6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lin28bQ45KJ6 Gm45364-201ENSMUST00000210883 159 ntBASIC22.27■■□□□ 1.16
Lin28bQ45KJ6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lin28bQ45KJ6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lin28bQ45KJ6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lin28bQ45KJ6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.26■■□□□ 1.15
Lin28bQ45KJ6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lin28bQ45KJ6 Gm9806-201ENSMUST00000051080 552 ntBASIC22.26■■□□□ 1.15
Lin28bQ45KJ6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lin28bQ45KJ6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lin28bQ45KJ6 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.25■■□□□ 1.15
Lin28bQ45KJ6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
Lin28bQ45KJ6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lin28bQ45KJ6 Gm11687-201ENSMUST00000118911 886 ntBASIC22.24■■□□□ 1.15
Lin28bQ45KJ6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lin28bQ45KJ6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms