Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lin28bQ45KJ6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.55■■□□□ 1.2
Lin28bQ45KJ6 Mir6538-201ENSMUST00000183713 110 ntBASIC22.55■■□□□ 1.2
Lin28bQ45KJ6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lin28bQ45KJ6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.53■■□□□ 1.2
Lin28bQ45KJ6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Lin28bQ45KJ6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lin28bQ45KJ6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lin28bQ45KJ6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lin28bQ45KJ6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Lin28bQ45KJ6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lin28bQ45KJ6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
Lin28bQ45KJ6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lin28bQ45KJ6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lin28bQ45KJ6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Lin28bQ45KJ6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lin28bQ45KJ6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.49■■□□□ 1.19
Lin28bQ45KJ6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lin28bQ45KJ6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lin28bQ45KJ6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lin28bQ45KJ6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.48■■□□□ 1.19
Lin28bQ45KJ6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lin28bQ45KJ6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lin28bQ45KJ6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.46■■□□□ 1.19
Lin28bQ45KJ6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
Lin28bQ45KJ6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lin28bQ45KJ6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Lin28bQ45KJ6 Cap2-205ENSMUST00000225824 1634 ntBASIC22.45■■□□□ 1.18
Lin28bQ45KJ6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Lin28bQ45KJ6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lin28bQ45KJ6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Lin28bQ45KJ6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lin28bQ45KJ6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lin28bQ45KJ6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lin28bQ45KJ6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Lin28bQ45KJ6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lin28bQ45KJ6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Lin28bQ45KJ6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lin28bQ45KJ6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Lin28bQ45KJ6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Amer2-203ENSMUST00000225247 2662 ntBASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lin28bQ45KJ6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lin28bQ45KJ6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lin28bQ45KJ6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Lin28bQ45KJ6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
Lin28bQ45KJ6 Gm4799-201ENSMUST00000095396 657 ntBASIC22.38■■□□□ 1.17
Lin28bQ45KJ6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lin28bQ45KJ6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.37■■□□□ 1.17
Lin28bQ45KJ6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lin28bQ45KJ6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Lin28bQ45KJ6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lin28bQ45KJ6 Scarna2-201ENSMUST00000157560 414 ntBASIC22.36■■□□□ 1.17
Lin28bQ45KJ6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.36■■□□□ 1.17
Lin28bQ45KJ6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.36■■□□□ 1.17
Lin28bQ45KJ6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lin28bQ45KJ6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Lin28bQ45KJ6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lin28bQ45KJ6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lin28bQ45KJ6 Gm37136-201ENSMUST00000194368 194 ntBASIC22.33■■□□□ 1.17
Lin28bQ45KJ6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lin28bQ45KJ6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Lin28bQ45KJ6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lin28bQ45KJ6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
Lin28bQ45KJ6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lin28bQ45KJ6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lin28bQ45KJ6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.31■■□□□ 1.16
Lin28bQ45KJ6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lin28bQ45KJ6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Lin28bQ45KJ6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.3■■□□□ 1.16
Lin28bQ45KJ6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lin28bQ45KJ6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Lin28bQ45KJ6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lin28bQ45KJ6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.29■■□□□ 1.16
Lin28bQ45KJ6 Mir3960-201ENSMUST00000198213 73 ntBASIC22.29■■□□□ 1.16
Lin28bQ45KJ6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.29■■□□□ 1.16
Lin28bQ45KJ6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lin28bQ45KJ6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lin28bQ45KJ6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lin28bQ45KJ6 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.28■■□□□ 1.16
Lin28bQ45KJ6 Gm16437-201ENSMUST00000025669 507 ntBASIC22.28■■□□□ 1.16
Lin28bQ45KJ6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lin28bQ45KJ6 Gm45364-201ENSMUST00000210883 159 ntBASIC22.27■■□□□ 1.16
Lin28bQ45KJ6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lin28bQ45KJ6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lin28bQ45KJ6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lin28bQ45KJ6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.26■■□□□ 1.15
Lin28bQ45KJ6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lin28bQ45KJ6 Gm9806-201ENSMUST00000051080 552 ntBASIC22.26■■□□□ 1.15
Lin28bQ45KJ6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lin28bQ45KJ6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lin28bQ45KJ6 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.25■■□□□ 1.15
Lin28bQ45KJ6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
Lin28bQ45KJ6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lin28bQ45KJ6 Gm11687-201ENSMUST00000118911 886 ntBASIC22.24■■□□□ 1.15
Lin28bQ45KJ6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lin28bQ45KJ6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms