Protein–RNA interactions for Protein: Q3V0S8

1700012B07Rik, MCG19638, isoform CRA_b, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700012B07RikQ3V0S8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
1700012B07RikQ3V0S8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
1700012B07RikQ3V0S8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
1700012B07RikQ3V0S8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
1700012B07RikQ3V0S8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
1700012B07RikQ3V0S8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
1700012B07RikQ3V0S8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
1700012B07RikQ3V0S8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
1700012B07RikQ3V0S8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
1700012B07RikQ3V0S8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
1700012B07RikQ3V0S8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
1700012B07RikQ3V0S8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
1700012B07RikQ3V0S8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
1700012B07RikQ3V0S8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
1700012B07RikQ3V0S8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
1700012B07RikQ3V0S8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
1700012B07RikQ3V0S8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
1700012B07RikQ3V0S8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
1700012B07RikQ3V0S8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
1700012B07RikQ3V0S8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
1700012B07RikQ3V0S8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
1700012B07RikQ3V0S8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
1700012B07RikQ3V0S8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.07■■□□□ 1.12
1700012B07RikQ3V0S8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
1700012B07RikQ3V0S8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
1700012B07RikQ3V0S8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
1700012B07RikQ3V0S8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
1700012B07RikQ3V0S8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
1700012B07RikQ3V0S8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.05■■□□□ 1.12
1700012B07RikQ3V0S8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
1700012B07RikQ3V0S8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
1700012B07RikQ3V0S8 Particl-201ENSMUST00000205370 1560 ntBASIC22.04■■□□□ 1.12
1700012B07RikQ3V0S8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
1700012B07RikQ3V0S8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
1700012B07RikQ3V0S8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
1700012B07RikQ3V0S8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
1700012B07RikQ3V0S8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
1700012B07RikQ3V0S8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
1700012B07RikQ3V0S8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.02■■□□□ 1.12
1700012B07RikQ3V0S8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.02■■□□□ 1.11
1700012B07RikQ3V0S8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
1700012B07RikQ3V0S8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
1700012B07RikQ3V0S8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22■■□□□ 1.11
1700012B07RikQ3V0S8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
1700012B07RikQ3V0S8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
1700012B07RikQ3V0S8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
1700012B07RikQ3V0S8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
1700012B07RikQ3V0S8 Gm7432-201ENSMUST00000210343 879 ntBASIC21.99■■□□□ 1.11
1700012B07RikQ3V0S8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
1700012B07RikQ3V0S8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
1700012B07RikQ3V0S8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
1700012B07RikQ3V0S8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
1700012B07RikQ3V0S8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
1700012B07RikQ3V0S8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
1700012B07RikQ3V0S8 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.96■■□□□ 1.11
1700012B07RikQ3V0S8 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.96■■□□□ 1.11
1700012B07RikQ3V0S8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
1700012B07RikQ3V0S8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
1700012B07RikQ3V0S8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
1700012B07RikQ3V0S8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
1700012B07RikQ3V0S8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
1700012B07RikQ3V0S8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
1700012B07RikQ3V0S8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.95■■□□□ 1.1
1700012B07RikQ3V0S8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.95■■□□□ 1.1
1700012B07RikQ3V0S8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
1700012B07RikQ3V0S8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
1700012B07RikQ3V0S8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
1700012B07RikQ3V0S8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
1700012B07RikQ3V0S8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
1700012B07RikQ3V0S8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
1700012B07RikQ3V0S8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
1700012B07RikQ3V0S8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
1700012B07RikQ3V0S8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
1700012B07RikQ3V0S8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.92■■□□□ 1.1
1700012B07RikQ3V0S8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
1700012B07RikQ3V0S8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
1700012B07RikQ3V0S8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
1700012B07RikQ3V0S8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
1700012B07RikQ3V0S8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
1700012B07RikQ3V0S8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
1700012B07RikQ3V0S8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
1700012B07RikQ3V0S8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
1700012B07RikQ3V0S8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
1700012B07RikQ3V0S8 Gm37136-201ENSMUST00000194368 194 ntBASIC21.89■■□□□ 1.09
1700012B07RikQ3V0S8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
1700012B07RikQ3V0S8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
1700012B07RikQ3V0S8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
1700012B07RikQ3V0S8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
1700012B07RikQ3V0S8 Gm11599-201ENSMUST00000118720 878 ntBASIC21.88■■□□□ 1.09
1700012B07RikQ3V0S8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.88■■□□□ 1.09
1700012B07RikQ3V0S8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.87■■□□□ 1.09
1700012B07RikQ3V0S8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
1700012B07RikQ3V0S8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
1700012B07RikQ3V0S8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
1700012B07RikQ3V0S8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
1700012B07RikQ3V0S8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
1700012B07RikQ3V0S8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.84■■□□□ 1.09
1700012B07RikQ3V0S8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
1700012B07RikQ3V0S8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
1700012B07RikQ3V0S8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms