Protein–RNA interactions for Protein: Q3U4K9

Gm11110, Predicted gene 11110, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11110Q3U4K9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm11110Q3U4K9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Gm11110Q3U4K9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11110Q3U4K9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.24■□□□□ 0.83
Gm11110Q3U4K9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11110Q3U4K9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Gm11110Q3U4K9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.24■□□□□ 0.83
Gm11110Q3U4K9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm11110Q3U4K9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11110Q3U4K9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Gm11110Q3U4K9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm11110Q3U4K9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11110Q3U4K9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm11110Q3U4K9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11110Q3U4K9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11110Q3U4K9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm11110Q3U4K9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11110Q3U4K9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm11110Q3U4K9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Gm11110Q3U4K9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11110Q3U4K9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11110Q3U4K9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm11110Q3U4K9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm11110Q3U4K9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Gm11110Q3U4K9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11110Q3U4K9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11110Q3U4K9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11110Q3U4K9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm11110Q3U4K9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11110Q3U4K9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.13■□□□□ 0.81
Gm11110Q3U4K9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11110Q3U4K9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11110Q3U4K9 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.12■□□□□ 0.81
Gm11110Q3U4K9 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.12■□□□□ 0.81
Gm11110Q3U4K9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
Gm11110Q3U4K9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11110Q3U4K9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm11110Q3U4K9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm11110Q3U4K9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm11110Q3U4K9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.11■□□□□ 0.81
Gm11110Q3U4K9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11110Q3U4K9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Gm11110Q3U4K9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11110Q3U4K9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11110Q3U4K9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11110Q3U4K9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm11110Q3U4K9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.09■□□□□ 0.81
Gm11110Q3U4K9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11110Q3U4K9 Particl-201ENSMUST00000205370 1560 ntBASIC20.08■□□□□ 0.81
Gm11110Q3U4K9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11110Q3U4K9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gm11110Q3U4K9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm11110Q3U4K9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm11110Q3U4K9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11110Q3U4K9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11110Q3U4K9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11110Q3U4K9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11110Q3U4K9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11110Q3U4K9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11110Q3U4K9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11110Q3U4K9 Nkain2-201ENSMUST00000092602 558 ntBASIC20.05■□□□□ 0.8
Gm11110Q3U4K9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11110Q3U4K9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm11110Q3U4K9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Gm11110Q3U4K9 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.03■□□□□ 0.8
Gm11110Q3U4K9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gm11110Q3U4K9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11110Q3U4K9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11110Q3U4K9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm11110Q3U4K9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11110Q3U4K9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11110Q3U4K9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm11110Q3U4K9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Gm11110Q3U4K9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11110Q3U4K9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm11110Q3U4K9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11110Q3U4K9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm11110Q3U4K9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm11110Q3U4K9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gm11110Q3U4K9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm11110Q3U4K9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm11110Q3U4K9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20■□□□□ 0.79
Gm11110Q3U4K9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm11110Q3U4K9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11110Q3U4K9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11110Q3U4K9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm11110Q3U4K9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.99■□□□□ 0.79
Gm11110Q3U4K9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Gm11110Q3U4K9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm11110Q3U4K9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm11110Q3U4K9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Gm11110Q3U4K9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Gm11110Q3U4K9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm11110Q3U4K9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm11110Q3U4K9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.97■□□□□ 0.79
Gm11110Q3U4K9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.96■□□□□ 0.79
Gm11110Q3U4K9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm11110Q3U4K9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm11110Q3U4K9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm11110Q3U4K9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms