Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Q3U1D9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q3U1D9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Q3U1D9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q3U1D9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Q3U1D9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q3U1D9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.53■□□□□ 0.88
Q3U1D9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Q3U1D9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Q3U1D9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Q3U1D9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.52■□□□□ 0.88
Q3U1D9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Q3U1D9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q3U1D9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q3U1D9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.51■□□□□ 0.87
Q3U1D9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Q3U1D9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q3U1D9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q3U1D9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.5■□□□□ 0.87
Q3U1D9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.5■□□□□ 0.87
Q3U1D9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Q3U1D9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Q3U1D9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Q3U1D9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q3U1D9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q3U1D9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q3U1D9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q3U1D9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Q3U1D9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q3U1D9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q3U1D9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q3U1D9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Q3U1D9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q3U1D9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Q3U1D9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Q3U1D9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q3U1D9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.47■□□□□ 0.87
Q3U1D9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q3U1D9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q3U1D9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Q3U1D9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q3U1D9 Gm37136-201ENSMUST00000194368 194 ntBASIC20.45■□□□□ 0.86
Q3U1D9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.45■□□□□ 0.86
Q3U1D9 Gm4799-201ENSMUST00000095396 657 ntBASIC20.45■□□□□ 0.86
Q3U1D9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q3U1D9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q3U1D9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Q3U1D9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q3U1D9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q3U1D9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.43■□□□□ 0.86
Q3U1D9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Q3U1D9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Q3U1D9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Q3U1D9 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.42■□□□□ 0.86
Q3U1D9 Gm11175-201ENSMUST00000116172 543 ntBASIC20.42■□□□□ 0.86
Q3U1D9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.42■□□□□ 0.86
Q3U1D9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q3U1D9 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.41■□□□□ 0.86
Q3U1D9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q3U1D9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q3U1D9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q3U1D9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.4■□□□□ 0.86
Q3U1D9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Q3U1D9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q3U1D9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q3U1D9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q3U1D9 Mir3960-201ENSMUST00000198213 73 ntBASIC20.38■□□□□ 0.85
Q3U1D9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q3U1D9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Q3U1D9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q3U1D9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Q3U1D9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q3U1D9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Q3U1D9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q3U1D9 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.35■□□□□ 0.85
Q3U1D9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q3U1D9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q3U1D9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
Q3U1D9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q3U1D9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q3U1D9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q3U1D9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q3U1D9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Q3U1D9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q3U1D9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Q3U1D9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Q3U1D9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q3U1D9 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.32■□□□□ 0.84
Q3U1D9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Q3U1D9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q3U1D9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q3U1D9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.31■□□□□ 0.84
Q3U1D9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q3U1D9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q3U1D9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Q3U1D9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q3U1D9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.3■□□□□ 0.84
Q3U1D9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q3U1D9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q3U1D9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms