Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pkd1l3Q2EG98 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.35■■□□□ 1.01
Pkd1l3Q2EG98 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pkd1l3Q2EG98 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pkd1l3Q2EG98 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.33■■□□□ 1
Pkd1l3Q2EG98 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pkd1l3Q2EG98 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pkd1l3Q2EG98 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pkd1l3Q2EG98 Mir6538-201ENSMUST00000183713 110 ntBASIC21.3■■□□□ 1
Pkd1l3Q2EG98 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pkd1l3Q2EG98 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pkd1l3Q2EG98 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pkd1l3Q2EG98 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pkd1l3Q2EG98 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pkd1l3Q2EG98 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pkd1l3Q2EG98 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pkd1l3Q2EG98 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.27■■□□□ 1
Pkd1l3Q2EG98 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pkd1l3Q2EG98 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pkd1l3Q2EG98 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pkd1l3Q2EG98 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Pkd1l3Q2EG98 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pkd1l3Q2EG98 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pkd1l3Q2EG98 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pkd1l3Q2EG98 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pkd1l3Q2EG98 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pkd1l3Q2EG98 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pkd1l3Q2EG98 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pkd1l3Q2EG98 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.25■□□□□ 0.99
Pkd1l3Q2EG98 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pkd1l3Q2EG98 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pkd1l3Q2EG98 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pkd1l3Q2EG98 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pkd1l3Q2EG98 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pkd1l3Q2EG98 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.24■□□□□ 0.99
Pkd1l3Q2EG98 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.24■□□□□ 0.99
Pkd1l3Q2EG98 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pkd1l3Q2EG98 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pkd1l3Q2EG98 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pkd1l3Q2EG98 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pkd1l3Q2EG98 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Pkd1l3Q2EG98 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pkd1l3Q2EG98 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pkd1l3Q2EG98 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pkd1l3Q2EG98 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pkd1l3Q2EG98 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.21■□□□□ 0.99
Pkd1l3Q2EG98 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pkd1l3Q2EG98 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pkd1l3Q2EG98 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pkd1l3Q2EG98 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pkd1l3Q2EG98 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Pkd1l3Q2EG98 Cap2-205ENSMUST00000225824 1634 ntBASIC21.19■□□□□ 0.98
Pkd1l3Q2EG98 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pkd1l3Q2EG98 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pkd1l3Q2EG98 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Pkd1l3Q2EG98 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.18■□□□□ 0.98
Pkd1l3Q2EG98 Gm45364-201ENSMUST00000210883 159 ntBASIC21.17■□□□□ 0.98
Pkd1l3Q2EG98 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pkd1l3Q2EG98 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pkd1l3Q2EG98 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pkd1l3Q2EG98 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.15■□□□□ 0.98
Pkd1l3Q2EG98 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pkd1l3Q2EG98 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pkd1l3Q2EG98 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pkd1l3Q2EG98 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Pkd1l3Q2EG98 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.13■□□□□ 0.97
Pkd1l3Q2EG98 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pkd1l3Q2EG98 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pkd1l3Q2EG98 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pkd1l3Q2EG98 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pkd1l3Q2EG98 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Pkd1l3Q2EG98 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pkd1l3Q2EG98 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pkd1l3Q2EG98 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pkd1l3Q2EG98 Gm37136-201ENSMUST00000194368 194 ntBASIC21.1■□□□□ 0.97
Pkd1l3Q2EG98 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pkd1l3Q2EG98 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pkd1l3Q2EG98 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pkd1l3Q2EG98 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.08■□□□□ 0.97
Pkd1l3Q2EG98 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.08■□□□□ 0.97
Pkd1l3Q2EG98 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pkd1l3Q2EG98 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
Pkd1l3Q2EG98 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.08■□□□□ 0.96
Pkd1l3Q2EG98 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pkd1l3Q2EG98 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pkd1l3Q2EG98 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pkd1l3Q2EG98 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pkd1l3Q2EG98 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pkd1l3Q2EG98 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.05■□□□□ 0.96
Pkd1l3Q2EG98 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pkd1l3Q2EG98 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pkd1l3Q2EG98 Gm16437-201ENSMUST00000025669 507 ntBASIC21.04■□□□□ 0.96
Pkd1l3Q2EG98 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pkd1l3Q2EG98 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pkd1l3Q2EG98 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Pkd1l3Q2EG98 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pkd1l3Q2EG98 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.02■□□□□ 0.96
Pkd1l3Q2EG98 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pkd1l3Q2EG98 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pkd1l3Q2EG98 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms