Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.18■■□□□ 1.14
Nkx3-2P97503 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Nkx3-2P97503 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Nkx3-2P97503 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nkx3-2P97503 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nkx3-2P97503 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nkx3-2P97503 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Nkx3-2P97503 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Nkx3-2P97503 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nkx3-2P97503 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Nkx3-2P97503 Particl-201ENSMUST00000205370 1560 ntBASIC22.16■■□□□ 1.14
Nkx3-2P97503 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Nkx3-2P97503 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nkx3-2P97503 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nkx3-2P97503 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.15■■□□□ 1.14
Nkx3-2P97503 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nkx3-2P97503 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.11■■□□□ 1.13
Nkx3-2P97503 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nkx3-2P97503 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.11■■□□□ 1.13
Nkx3-2P97503 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nkx3-2P97503 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.09■■□□□ 1.13
Nkx3-2P97503 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nkx3-2P97503 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.08■■□□□ 1.13
Nkx3-2P97503 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Nkx3-2P97503 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Nkx3-2P97503 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Nkx3-2P97503 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
Nkx3-2P97503 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.08■■□□□ 1.12
Nkx3-2P97503 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.08■■□□□ 1.12
Nkx3-2P97503 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nkx3-2P97503 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nkx3-2P97503 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.07■■□□□ 1.12
Nkx3-2P97503 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.07■■□□□ 1.12
Nkx3-2P97503 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Nkx3-2P97503 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nkx3-2P97503 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.06■■□□□ 1.12
Nkx3-2P97503 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Nkx3-2P97503 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Nkx3-2P97503 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nkx3-2P97503 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nkx3-2P97503 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nkx3-2P97503 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nkx3-2P97503 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx3-2P97503 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.03■■□□□ 1.12
Nkx3-2P97503 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nkx3-2P97503 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nkx3-2P97503 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Nkx3-2P97503 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.02■■□□□ 1.12
Nkx3-2P97503 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nkx3-2P97503 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nkx3-2P97503 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Nkx3-2P97503 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nkx3-2P97503 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nkx3-2P97503 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22■■□□□ 1.11
Nkx3-2P97503 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nkx3-2P97503 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nkx3-2P97503 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nkx3-2P97503 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Nkx3-2P97503 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nkx3-2P97503 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.98■■□□□ 1.11
Nkx3-2P97503 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nkx3-2P97503 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Nkx3-2P97503 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Nkx3-2P97503 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.96■■□□□ 1.11
Nkx3-2P97503 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Nkx3-2P97503 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Nkx3-2P97503 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Nkx3-2P97503 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Nkx3-2P97503 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.95■■□□□ 1.1
Nkx3-2P97503 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.95■■□□□ 1.1
Nkx3-2P97503 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nkx3-2P97503 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nkx3-2P97503 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Nkx3-2P97503 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Nkx3-2P97503 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Nkx3-2P97503 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nkx3-2P97503 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nkx3-2P97503 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Nkx3-2P97503 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nkx3-2P97503 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nkx3-2P97503 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nkx3-2P97503 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Nkx3-2P97503 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.92■■□□□ 1.1
Nkx3-2P97503 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nkx3-2P97503 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nkx3-2P97503 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nkx3-2P97503 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nkx3-2P97503 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nkx3-2P97503 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.9■■□□□ 1.1
Nkx3-2P97503 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nkx3-2P97503 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nkx3-2P97503 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.9■■□□□ 1.1
Nkx3-2P97503 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Nkx3-2P97503 Mir6538-201ENSMUST00000183713 110 ntBASIC21.89■■□□□ 1.09
Nkx3-2P97503 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.88■■□□□ 1.09
Nkx3-2P97503 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx3-2P97503 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.88■■□□□ 1.09
Nkx3-2P97503 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx3-2P97503 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Nkx3-2P97503 Gm37136-201ENSMUST00000194368 194 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms