Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm5P62322 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm5P62322 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm5P62322 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm5P62322 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm5P62322 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm5P62322 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm5P62322 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Lsm5P62322 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Lsm5P62322 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Lsm5P62322 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.51■□□□□ 0.71
Lsm5P62322 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm5P62322 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm5P62322 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.51■□□□□ 0.71
Lsm5P62322 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm5P62322 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm5P62322 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Lsm5P62322 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lsm5P62322 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm5P62322 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm5P62322 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm5P62322 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm5P62322 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm5P62322 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm5P62322 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Lsm5P62322 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm5P62322 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm5P62322 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm5P62322 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm5P62322 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm5P62322 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm5P62322 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm5P62322 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm5P62322 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Lsm5P62322 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm5P62322 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lsm5P62322 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm5P62322 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm5P62322 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm5P62322 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm5P62322 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm5P62322 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lsm5P62322 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm5P62322 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm5P62322 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm5P62322 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Lsm5P62322 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.42■□□□□ 0.7
Lsm5P62322 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lsm5P62322 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm5P62322 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm5P62322 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm5P62322 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lsm5P62322 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm5P62322 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lsm5P62322 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lsm5P62322 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lsm5P62322 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm5P62322 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm5P62322 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.38■□□□□ 0.69
Lsm5P62322 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm5P62322 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm5P62322 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm5P62322 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm5P62322 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Lsm5P62322 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Lsm5P62322 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm5P62322 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm5P62322 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lsm5P62322 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Lsm5P62322 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm5P62322 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm5P62322 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Lsm5P62322 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm5P62322 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm5P62322 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm5P62322 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Lsm5P62322 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.34■□□□□ 0.69
Lsm5P62322 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lsm5P62322 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Lsm5P62322 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm5P62322 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm5P62322 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm5P62322 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm5P62322 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm5P62322 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm5P62322 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Lsm5P62322 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Lsm5P62322 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm5P62322 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Lsm5P62322 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Lsm5P62322 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm5P62322 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm5P62322 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm5P62322 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lsm5P62322 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm5P62322 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm5P62322 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm5P62322 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm5P62322 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm5P62322 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms