Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Hmgcs2P54869 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Hmgcs2P54869 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Hmgcs2P54869 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Hmgcs2P54869 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.82■■□□□ 1.88
Hmgcs2P54869 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Hmgcs2P54869 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Hmgcs2P54869 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Hmgcs2P54869 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Hmgcs2P54869 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Hmgcs2P54869 Gm9806-201ENSMUST00000051080 552 ntBASIC26.81■■□□□ 1.88
Hmgcs2P54869 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Hmgcs2P54869 Gm4799-201ENSMUST00000095396 657 ntBASIC26.81■■□□□ 1.88
Hmgcs2P54869 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.8■■□□□ 1.88
Hmgcs2P54869 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Hmgcs2P54869 Gm11687-201ENSMUST00000118911 886 ntBASIC26.8■■□□□ 1.88
Hmgcs2P54869 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Hmgcs2P54869 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.8■■□□□ 1.88
Hmgcs2P54869 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Hmgcs2P54869 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Hmgcs2P54869 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.79■■□□□ 1.88
Hmgcs2P54869 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.79■■□□□ 1.88
Hmgcs2P54869 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.79■■□□□ 1.88
Hmgcs2P54869 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.79■■□□□ 1.88
Hmgcs2P54869 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.78■■□□□ 1.88
Hmgcs2P54869 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Hmgcs2P54869 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.77■■□□□ 1.88
Hmgcs2P54869 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Hmgcs2P54869 Gm16437-201ENSMUST00000025669 507 ntBASIC26.76■■□□□ 1.87
Hmgcs2P54869 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Hmgcs2P54869 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Hmgcs2P54869 Mir3960-201ENSMUST00000198213 73 ntBASIC26.75■■□□□ 1.87
Hmgcs2P54869 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.75■■□□□ 1.87
Hmgcs2P54869 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Hmgcs2P54869 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Hmgcs2P54869 Gm37136-201ENSMUST00000194368 194 ntBASIC26.73■■□□□ 1.87
Hmgcs2P54869 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Hmgcs2P54869 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.72■■□□□ 1.87
Hmgcs2P54869 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.72■■□□□ 1.87
Hmgcs2P54869 Gm45364-201ENSMUST00000210883 159 ntBASIC26.72■■□□□ 1.87
Hmgcs2P54869 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Hmgcs2P54869 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Hmgcs2P54869 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Hmgcs2P54869 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.71■■□□□ 1.87
Hmgcs2P54869 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Hmgcs2P54869 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Hmgcs2P54869 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Hmgcs2P54869 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Hmgcs2P54869 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.69■■□□□ 1.86
Hmgcs2P54869 Gm12366-201ENSMUST00000121722 873 ntBASIC26.69■■□□□ 1.86
Hmgcs2P54869 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.69■■□□□ 1.86
Hmgcs2P54869 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Hmgcs2P54869 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.69■■□□□ 1.86
Hmgcs2P54869 Gm5786-201ENSMUST00000085368 882 ntBASIC26.69■■□□□ 1.86
Hmgcs2P54869 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Hmgcs2P54869 Zxda-201ENSMUST00000117281 2621 ntBASIC26.69■■□□□ 1.86
Hmgcs2P54869 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.68■■□□□ 1.86
Hmgcs2P54869 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.67■■□□□ 1.86
Hmgcs2P54869 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Hmgcs2P54869 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Hmgcs2P54869 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Hmgcs2P54869 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Hmgcs2P54869 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Hmgcs2P54869 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.65■■□□□ 1.86
Hmgcs2P54869 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Hmgcs2P54869 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Hmgcs2P54869 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Hmgcs2P54869 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Hmgcs2P54869 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Hmgcs2P54869 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Hmgcs2P54869 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.62■■□□□ 1.85
Hmgcs2P54869 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Hmgcs2P54869 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Hmgcs2P54869 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.6■■□□□ 1.85
Hmgcs2P54869 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Hmgcs2P54869 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.58■■□□□ 1.85
Hmgcs2P54869 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Hmgcs2P54869 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Hmgcs2P54869 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Hmgcs2P54869 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Hmgcs2P54869 Gm27502-201ENSMUST00000183495 199 ntBASIC26.56■■□□□ 1.84
Hmgcs2P54869 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.56■■□□□ 1.84
Hmgcs2P54869 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Hmgcs2P54869 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Hmgcs2P54869 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Hmgcs2P54869 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.55■■□□□ 1.84
Hmgcs2P54869 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Hmgcs2P54869 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Hmgcs2P54869 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Hmgcs2P54869 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Hmgcs2P54869 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.53■■□□□ 1.84
Hmgcs2P54869 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Hmgcs2P54869 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Hmgcs2P54869 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.52■■□□□ 1.84
Hmgcs2P54869 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Hmgcs2P54869 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Hmgcs2P54869 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Hmgcs2P54869 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.51■■□□□ 1.83
Hmgcs2P54869 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Hmgcs2P54869 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms