Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl9P51670 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl9P51670 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Ccl9P51670 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl9P51670 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl9P51670 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl9P51670 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl9P51670 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl9P51670 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl9P51670 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ccl9P51670 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccl9P51670 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Ccl9P51670 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl9P51670 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Ccl9P51670 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl9P51670 Gm30023-201ENSMUST00000197970 889 ntBASIC20.49■□□□□ 0.87
Ccl9P51670 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Ccl9P51670 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccl9P51670 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccl9P51670 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccl9P51670 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccl9P51670 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccl9P51670 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccl9P51670 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccl9P51670 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccl9P51670 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccl9P51670 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccl9P51670 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccl9P51670 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccl9P51670 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccl9P51670 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccl9P51670 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccl9P51670 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccl9P51670 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccl9P51670 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccl9P51670 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccl9P51670 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccl9P51670 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccl9P51670 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccl9P51670 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccl9P51670 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccl9P51670 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ccl9P51670 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccl9P51670 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccl9P51670 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccl9P51670 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccl9P51670 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccl9P51670 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccl9P51670 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Ccl9P51670 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ccl9P51670 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ccl9P51670 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccl9P51670 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccl9P51670 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccl9P51670 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccl9P51670 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccl9P51670 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccl9P51670 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccl9P51670 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccl9P51670 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccl9P51670 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ccl9P51670 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccl9P51670 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccl9P51670 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccl9P51670 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccl9P51670 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccl9P51670 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccl9P51670 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccl9P51670 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccl9P51670 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.32■□□□□ 0.84
Ccl9P51670 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccl9P51670 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccl9P51670 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccl9P51670 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccl9P51670 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccl9P51670 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccl9P51670 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccl9P51670 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccl9P51670 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccl9P51670 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.3■□□□□ 0.84
Ccl9P51670 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccl9P51670 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccl9P51670 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccl9P51670 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ccl9P51670 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccl9P51670 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccl9P51670 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccl9P51670 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccl9P51670 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccl9P51670 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccl9P51670 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccl9P51670 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccl9P51670 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccl9P51670 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccl9P51670 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl9P51670 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl9P51670 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl9P51670 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl9P51670 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ccl9P51670 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms