Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf9P20334 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf9P20334 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf9P20334 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf9P20334 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tnfrsf9P20334 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.85■□□□□ 0.61
Tnfrsf9P20334 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf9P20334 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf9P20334 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfrsf9P20334 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Tnfrsf9P20334 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf9P20334 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.83■□□□□ 0.6
Tnfrsf9P20334 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tnfrsf9P20334 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf9P20334 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf9P20334 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf9P20334 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf9P20334 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf9P20334 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf9P20334 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf9P20334 Amer2-203ENSMUST00000225247 2662 ntBASIC18.8■□□□□ 0.6
Tnfrsf9P20334 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf9P20334 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tnfrsf9P20334 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf9P20334 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf9P20334 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf9P20334 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf9P20334 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf9P20334 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf9P20334 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf9P20334 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.79■□□□□ 0.6
Tnfrsf9P20334 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf9P20334 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf9P20334 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf9P20334 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf9P20334 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf9P20334 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf9P20334 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf9P20334 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf9P20334 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf9P20334 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf9P20334 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf9P20334 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf9P20334 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf9P20334 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf9P20334 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf9P20334 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf9P20334 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf9P20334 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf9P20334 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf9P20334 Scarna2-201ENSMUST00000157560 414 ntBASIC18.74■□□□□ 0.59
Tnfrsf9P20334 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf9P20334 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf9P20334 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf9P20334 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf9P20334 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf9P20334 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf9P20334 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf9P20334 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf9P20334 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf9P20334 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf9P20334 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf9P20334 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf9P20334 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf9P20334 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf9P20334 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf9P20334 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf9P20334 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf9P20334 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf9P20334 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf9P20334 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf9P20334 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf9P20334 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf9P20334 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.7■□□□□ 0.58
Tnfrsf9P20334 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.7■□□□□ 0.58
Tnfrsf9P20334 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf9P20334 Particl-201ENSMUST00000205370 1560 ntBASIC18.69■□□□□ 0.58
Tnfrsf9P20334 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf9P20334 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf9P20334 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf9P20334 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf9P20334 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf9P20334 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.68■□□□□ 0.58
Tnfrsf9P20334 Gm11687-201ENSMUST00000118911 886 ntBASIC18.68■□□□□ 0.58
Tnfrsf9P20334 Gm12366-201ENSMUST00000121722 873 ntBASIC18.68■□□□□ 0.58
Tnfrsf9P20334 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf9P20334 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tnfrsf9P20334 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.68■□□□□ 0.58
Tnfrsf9P20334 Gm5786-201ENSMUST00000085368 882 ntBASIC18.68■□□□□ 0.58
Tnfrsf9P20334 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf9P20334 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf9P20334 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf9P20334 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf9P20334 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf9P20334 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf9P20334 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf9P20334 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf9P20334 Gm4799-201ENSMUST00000095396 657 ntBASIC18.66■□□□□ 0.58
Tnfrsf9P20334 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf9P20334 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms