Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgn1P18608 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgn1P18608 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgn1P18608 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgn1P18608 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgn1P18608 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgn1P18608 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgn1P18608 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgn1P18608 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.54■■□□□ 1.04
Hmgn1P18608 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgn1P18608 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgn1P18608 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgn1P18608 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgn1P18608 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgn1P18608 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgn1P18608 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgn1P18608 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Hmgn1P18608 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Hmgn1P18608 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmgn1P18608 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.51■■□□□ 1.03
Hmgn1P18608 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Hmgn1P18608 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Hmgn1P18608 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Hmgn1P18608 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmgn1P18608 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hmgn1P18608 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hmgn1P18608 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hmgn1P18608 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hmgn1P18608 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Hmgn1P18608 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgn1P18608 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgn1P18608 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgn1P18608 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Hmgn1P18608 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgn1P18608 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgn1P18608 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgn1P18608 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Hmgn1P18608 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgn1P18608 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgn1P18608 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgn1P18608 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgn1P18608 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Hmgn1P18608 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Hmgn1P18608 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgn1P18608 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgn1P18608 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgn1P18608 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgn1P18608 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgn1P18608 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgn1P18608 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Hmgn1P18608 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Hmgn1P18608 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.42■■□□□ 1.02
Hmgn1P18608 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgn1P18608 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgn1P18608 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgn1P18608 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgn1P18608 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.4■■□□□ 1.02
Hmgn1P18608 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hmgn1P18608 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hmgn1P18608 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Hmgn1P18608 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.39■■□□□ 1.01
Hmgn1P18608 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.39■■□□□ 1.01
Hmgn1P18608 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hmgn1P18608 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hmgn1P18608 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.39■■□□□ 1.01
Hmgn1P18608 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgn1P18608 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.38■■□□□ 1.01
Hmgn1P18608 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgn1P18608 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgn1P18608 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Hmgn1P18608 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgn1P18608 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgn1P18608 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Hmgn1P18608 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Hmgn1P18608 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgn1P18608 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgn1P18608 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.34■■□□□ 1.01
Hmgn1P18608 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgn1P18608 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.34■■□□□ 1.01
Hmgn1P18608 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hmgn1P18608 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Hmgn1P18608 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgn1P18608 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.32■■□□□ 1
Hmgn1P18608 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.32■■□□□ 1
Hmgn1P18608 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.32■■□□□ 1
Hmgn1P18608 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgn1P18608 Particl-201ENSMUST00000205370 1560 ntBASIC21.31■■□□□ 1
Hmgn1P18608 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Hmgn1P18608 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hmgn1P18608 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.3■■□□□ 1
Hmgn1P18608 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Hmgn1P18608 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.3■■□□□ 1
Hmgn1P18608 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgn1P18608 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgn1P18608 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgn1P18608 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgn1P18608 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgn1P18608 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmgn1P18608 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmgn1P18608 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 152.6 ms